KEGG   Ziziphus jujuba (Chinese jujube): 107421776
Entry
107421776         CDS       T04794                                 
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
  KO
K10882  crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107421776
   03460 Fanconi anemia pathway
    107421776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107421776
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107421776
SSDB
Motif
Pfam: ERCC4 EME1-MUS81_C RMI1_N_C Nitro_FeMo-Co
Other DBs
NCBI-GeneID: 107421776
NCBI-ProteinID: XP_015886576
UniProt: A0A6P4AE91
LinkDB
Position
7:complement(join(20790417..20790587,20791045..20791159,20792934..20793023,20793331..20793449,20793561..20793624,20794815..20794990,20795810..20795919,20796081..20796234,20796312..20796491,20797079..20797149,20797295..20797450,20797835..20798117))
AA seq 562 aa
MSHPIVLSDEEDQNELSTPFHPIRFKKRRTEPDSTTMIPTVLILDDDPTPKKPGLNSTPS
FVPETPMSNVAIVKCTTAVSDPQNSNSNFEEKFSDINGLICLESDNESEGGNRRENWKDS
EAICSDFGSGKDSDRSFTFTESTCSLRHADLAQMSEDYSCPTSLQDDIPQVHESPDNGHS
SMDQMEGSEEERRSRVNVKKKNSTSGAMGRKKMTKDERDRLMEEKKLKKLQEKLQKAALK
AEAAEFKKVEKEKKKWENGKFALKSIVAEIDAKVVELGSIGGNLLTRFAEKGLTYRITSN
PIERSIIWTMNFPEHISRLSPEGVEIQYVMLVYEAEEFCDLVIKESLLDHVYGVRNRYPS
HTVCYLTNRLMSFINKREQEHYKNPTNNNGWRRPSVEEVLAKVTTHFVKVHSRQCVDEAE
LAEHIVGLTCSLASCQYRKKLTRLSVNANGSLIPKDSIDRNLIKKSLWLKTLVAIPKVQP
RFAIAIWKRYPTMKSLLSVYMDPSKSVHEKEFLLEDLTTEGLLGGDRRLGEVCSKRVYRI
LTAQSGCIKTDEIEEGADFFRC
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgtctcacccaatcgtcctctccgacgaggaggatcagaatgagctctcgaccccattc
cacccaatccgattcaagaagcggcgaaccgaaccggacagtaccacgatgatccctacg
gtactcatcctcgacgacgacccgactccgaagaagccaggcctcaactctacgccttcc
tttgtcccagagacaccgatgtctaacgttgcaattgtcaaatgcacgacggcagtgtcc
gatccccaaaatagtaattcgaatttcgaggaaaaattcagtgatattaatggattgatt
tgtttggagtctgataatgaatccgaaggcggaaatcgaagggaaaactggaaagacagt
gaggcaatttgttctgattttggttcagggaaggactcagatcggagttttacctttact
gagtcaacatgttctctcagacatgctgatctagcacaaatgtctgaagattattcatgt
ccgacctctttacaagatgatattccgcaggtacatgaaagtcctgacaacggacatagt
agcatggatcagatggagggcagtgaggaagagagaagaagcagagtcaacgtcaagaag
aaaaatagtacaagcggagcaatgggaagaaagaagatgacaaaagatgaaagggatcga
ctaatggaagagaagaaactgaagaagcttcaagagaagttgcaaaaagcggcactgaaa
gctgaagctgccgagtttaaaaaagtagagaaagaaaagaagaagtgggaaaatgggaaa
ttcgccctaaaatccattgtggctgagattgatgcaaaagtagttgaactggggtcaatt
ggaggaaatctgctgacaaggtttgctgaaaaggggcttacatatcgtataacatcaaat
ccaattgaaagatcaattatttggactatgaactttccagaacatatatctcggctttct
cctgaaggagtagagattcaatatgtgatgcttgtatatgaggctgaagaattttgtgat
cttgttatcaaagaatcccttttggaccatgtttatggcgttcgaaatcgttatccatcc
catacagtgtgttacctaacaaataggttaatgtcatttataaataaaagggaacaagag
cactacaagaacccaacgaataataatggttggagacgtccatctgttgaggaggttctg
gcaaaagtaacaactcactttgttaaagtacattccaggcagtgtgtagatgaggctgaa
ctagctgaacatattgttggtttgacctgcagtctagcatcttgccaatataggaagaag
ttaactcgattgtcagtaaatgctaatgggtcccttatccctaaggattctatcgaccga
aatttaattaaaaagagcttgtggttaaaaactttagtagctataccaaaggtgcagcca
cggtttgctatagctatatggaagaggtacccgactatgaaatcccttttgagtgtttac
atggacccgagtaaatcggtgcatgaaaaagagtttttgctagaggacttgacaacagag
gggttgcttggtggggacaggagattaggggaagtttgttcaaagagagtgtatagaata
cttacggcacaaagtggatgtattaagactgacgaaattgaggagggtgcagattttttc
agatgttga

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