Ziziphus jujuba (Chinese jujube): 107421967
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Entry
107421967 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107421967 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107421967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107421967
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107421967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
107421967
NCBI-ProteinID:
XP_015886824
UniProt:
A0A6P4ALL5
LinkDB
All DBs
Position
3:join(2650731..2650910,2655008..2655079,2656493..2656582,2657084..2657126,2658461..2658567,2659079..2659174,2659277..2659467,2660173..2660242,2660611..2660721)
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AA seq
319 aa
AA seq
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MANLPQSLSMNVGFGGPSASTPSVSGAQGNKDRKMASAEHLVLELSNPDLRENALLELSK
KREIFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFLAVGRVLGNMVAALADNP
SSRLLKHIIRCYLRLTDNLRACEALRNCLPDMLRDATFNECLREDPTTRRWLQQLLHNTG
VSRVPSFQAGGGFDHMMVN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcttccccagtcgctatcaatgaatgtgggatttggaggtccaagtgcatca
acaccaagcgtatcaggtgctcaaggaaacaaagataggaaaatggcatcggctgaacac
ttggttcttgagctcagtaaccctgatcttagggaaaatgctttgcttgaactctccaag
aagagagaaatatttcaagatttggctccattgttgtggaattcttttggtactattgct
gcactgttacaggagatagtatcaatttatcctgttttatcgccaccaaatttgactcct
gcacaatcaaatcgggtttgcaatgcgcttgctcttcttcagtgtgtagcttcccaccca
gatacaaggatgttgttcctcaacgcccatatacctttgtatctctatcctttccttaat
acaacaagcaagtcaagaccctttgagtacctgaggctcactagtttaggtgtcatcggt
gccttggtgaaggttgatgatacagaagttattagtttccttctctctacagaaataata
cccttgtgcttgcgcacgatggagatgggaagcgaattatcaaaaacagtagctacattt
atagttcaaaagattttattggatgatgtgggtttggattacatttgtactacagcagag
cggtttcttgcagttggtcgggttttaggcaacatggttgcagcactagctgataaccca
tcttcgcgtctgttaaagcatatcatcagatgttatcttcgactgacggataatctaagg
gcctgtgaagcattaagaaactgtcttccagacatgttaagagatgccactttcaatgaa
tgcctgcgtgaagatccaactacaagaaggtggctgcagcagctgttgcacaacaccggg
gtaagccgtgttccatcgttccaagcgggcggaggttttgatcatatgatggtgaattaa
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