KEGG   Ziziphus jujuba (Chinese jujube): 107422201
Entry
107422201         CDS       T04794                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
zju03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107422201
   03460 Fanconi anemia pathway
    107422201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zju03032]
    107422201
   03400 DNA repair and recombination proteins [BR:zju03400]
    107422201
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     107422201
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Topoisomerases
   107422201
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     107422201
   FA (Fanconi anemia) pathway
     107422201
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 107422201
NCBI-ProteinID: XP_015887107
UniProt: A0A6P4AM80
LinkDB
Position
3:complement(join(12808082..12808729,12809543..12809722,12810186..12810398,12810525..12810653,12810787..12810955,12812502..12812780,12813150..12813229,12815267..12815386,12815474..12815636,12816761..12817001,12818185..12818284,12819055..12819148,12819985..12820088,12820683..12820739,12820840..12820872))
AA seq 869 aa
MEMASTNKVLMVAEKPSIALSIASTLSHGRMSTRKGSTDVHEFDGSFLGFQAHYKVTSVI
GHVFSVDFPAPYQNWAATDPLDLFQAPICKAETNPKAHICRHLSQEARGCGHLVLWLDCD
REGENICFEVIECTGFHLNKGRRIYRARFSSVTEKDILGAMANLVEPNRHEALAVDARQE
IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYFQINTFKPEKFWSL
HPYIIYNGYELQLEWERKKLFDIDVVIMFQKLVMEDGITEVTEISEKQETKGRPPGLNTV
NLLKVASSALGLGPQVAMQVAERLYTQGFISYPRTESTSYPSSFDFKGTLGVLAKNPTWG
SYVQRLLADGYNKPRVGTDAGDHPPITPMLSATENELGKDAWRLYEYVCQHFIGTLSPDC
KYLRTKVEFSIGGESFQCVGQHVTVKGFTAIMPWLAIPEKNLPQFTKGEKIEISKVDLFE
GSTTPPDYLSESDLISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTPLGITLI
RGYQCIDPDLCLPDIRSFIEHQITLVAKGQADHIHVVQHVLLQFRQKYCYFVKQIENMNT
LFEAQFSALADSGRNLSKCGKCLRYMKYISSQPPRLYCNTCEEEYYLPQKGSIKLYKELT
CPLDNFELLIFSMPGPEGKSFPLCPYCYNSPPFEGIDTLYSAAKTTGSSKLGKGAGMPCF
LCPHPTCQHSMIAQGVCACPECSGTLVLDPVSAPKWRLYCNICNCLVFLPQGAHRISTTQ
ESCPECDSKIIEVDFNKKTTPLEDGATLYSGCILCDELLHSLVEMKHGKSFFKRMASRGR
GRGRGGVYRGRGRGSTGKKVDPKMSFRDF
NT seq 2610 nt   +upstreamnt  +downstreamnt
atggaaatggcttcgacaaacaaagttcttatggttgcagagaagcccagtattgctctc
tctatagcctccacactctcccacggtcgaatgtctacaagaaagggtagtacagatgtc
catgaatttgatgggagttttcttgggtttcaagcgcattataaagtgacatcagtaatt
gggcatgttttcagtgtagattttccagcaccatatcaaaactgggcagcaactgatcct
ctggatctctttcaagctcctatttgtaaggcagaaacaaacccaaaggctcatatatgt
agacatttaagtcaagaagctcgtggctgtgggcatttggtgttatggttggattgtgat
cgtgaaggagaaaatatatgtttcgaagttattgagtgcaccgggtttcatctaaataag
ggaagaaggatttatcgtgcacggttttcttctgttactgagaaagatattttgggggcg
atggccaaccttgttgaacctaatagacatgaagcactggcagtagatgctcggcaagag
atagatttgaaagttggtgttgcattcacacgatttcaaacaagttatttccaaggaaaa
tatgggaatcttgattccagggttatatcctatgggccttgtcaaactccaacccttgga
ttctgtgtacaacgctattttcagatcaacacctttaagccagaaaagttttggtcctta
cacccttatataatttataatggttatgaacttcagttagaatgggaacgtaagaagttg
tttgacatagatgttgtgataatgtttcagaagttagtaatggaagatggaattacagaa
gtgacagaaatatcagaaaagcaagaaacaaaaggacgtccacctggtcttaatacagtg
aatcttttgaaggttgcttcaagtgcattagggcttggacctcaagtggctatgcaagtt
gctgaacgcttgtatactcaaggtttcataagctatccacgtacagagagcacatcttat
ccttcttcatttgacttcaaaggaacacttggtgtactagcaaagaacccaacatggggt
agttatgtacagagattgcttgctgatggttataataaaccacgagtaggaacagatgca
ggtgaccatcctcctataacgccaatgctttcagcaactgagaatgagctaggcaaagat
gcttggagactatatgagtatgtgtgtcaacattttattggaaccttgtctcctgactgc
aagtatttaagaacaaaggtagaattttcaattggtggagaatccttccaatgtgtaggg
caacatgtcacagtgaaaggatttacagctattatgccttggttggcaatacctgagaaa
aatcttcctcagtttacaaaaggagagaagatagagatttcaaaagtggatctctttgag
ggaagtaccacacctccagattatctaagtgagagtgatctgatttctcttatggagaag
aatggaataggcacagatgcttcaattcctgttcatattaacaacatttgtgagcgtaat
tttgtgcaggtacaagctggtaggaagctagttccaactcccttgggtataaccctgata
agaggctatcaatgcattgatccagatctctgtttgccagacattcgtagtttcattgaa
caccagataactcttgttgctaagggtcaagcagatcacatacatgtcgtgcagcatgta
cttctacagttcagacaaaaatactgttatttcgttaaacagattgagaacatgaatact
ttatttgaagcccagttctctgcacttgccgactcaggacggaatctcagtaaatgtggc
aaatgtctccgatacatgaagtacatttctagccaacccccacgactttattgtaataca
tgtgaggaggaatattatcttcctcaaaagggttcaatcaagctgtacaaggaacttact
tgtcctttggataacttcgagcttttgatcttctccatgcctggtccagaaggcaagtca
ttccctctctgcccatactgctataatagtcctccatttgaaggaatagacacgctctac
agtgcagcaaaaaccactggttctagcaagttggggaagggagctggaatgccatgcttt
ctctgcccgcatcccacatgccaacattcaatgatagcacaaggagtatgtgcttgccca
gaatgtagtggaacgctggtcctagacccagtgagtgctcccaaatggcgactgtattgc
aatatttgcaactgccttgtcttccttccccaaggtgctcaccgaatatcaactacccaa
gagagttgtcctgaatgtgactctaaaatcatagaggtcgacttcaacaaaaagacgacg
cccttggaggacggagctacattgtacagcggttgcattctttgcgatgagttgcttcat
tcacttgtggagatgaaacatgggaagtcttttttcaaacgaatggcttcgagaggaaga
ggcagaggaagaggtggtgtatataggggaagagggcggggtagtactgggaaaaaggtt
gatccaaaaatgagctttcgagatttctga

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