KEGG   Ziziphus jujuba (Chinese jujube): 107422452
Entry
107422452         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107422452 isoform X1
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:zju03016]
    107422452
Enzymes [BR:zju01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     107422452
Transfer RNA biogenesis [BR:zju03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107422452
SSDB
Motif
Pfam: Pus10_C Pus10_N_euk
Other DBs
NCBI-GeneID: 107422452
NCBI-ProteinID: XP_015887395
UniProt: A0A6P4AFZ3
LinkDB
Position
5:join(1382196..1382342,1382523..1382875,1383130..1383250,1383352..1383469,1383731..1383876,1384240..1384311,1384567..1384635,1384728..1384808,1384884..1385003,1385079..1385153,1385309..1385389,1385679..1385752,1385852..1385912,1386104..1386159,1386672..1386780)
AA seq 560 aa
MGEETAQLNQLISAPVEVKSIAGEDDVRAIYEFARALPFQAVECLLSAKVCNQCILRLFG
ISEHLYYVSTLSPWLLSSVFGDFTDSEKQKCTKSKDSKVDSVLCSVCLGILQIIYCYDKE
LVVNKKSANDLAITIADLIKQEGYQIDGFSLEVSIPPVIQENESSVWLCLKKKFGSELWF
QGKSQSECISVKDALKISIIKPLESMLGCKSSISTFHVRLTYSHPVASTAIQNSINKNQG
FKRRKTGSGNGLKTVDDDLICSDFSMSDVDVVVERPLESLQANESSESFKFPSKLISKPC
QLVFSCYRTHIYFGGRYLKYSRNVSQTRWIVDDERMGEASVEELIGSNILPICHGDSYKF
HAAGREDIDVRMLGSGRPFLVEIQNARLMPSEDSVKNIEKHINKMEKKLVGVKNLKMVGS
EGWTLMREGESEKQKQYAALVWISRPLKDEDFQCISSLKDMHIMQKTPVRVLHRRSPLAR
EKIIHWMRLERICGHSQYFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSILDCRAEILQLD
VTDVKMDCFLTEEGYPLLQC
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgggtgaagaaactgcgcagttaaaccaacttatctccgcccccgttgaggtaaagtct
attgccggtgaagacgatgtgcgcgccatttacgagtttgcacgagccttgccttttcag
gccgtggagtgcttgttatcggcaaaggtttgcaaccaatgcattttgcggttgtttggg
attagtgagcatctttactatgttagcacgctatcaccgtggctactgagttctgttttt
ggagattttacagattcggagaaacaaaaatgtacaaaatctaaggattcaaaagttgat
tcggtgctttgtagtgtttgtttaggcatcttgcagattatttactgttatgacaaagag
ttggtggtaaacaagaaaagtgctaatgatttggccatcacaattgccgacctgataaag
caagagggctatcagattgatggcttttctcttgaagtatccataccaccagttattcaa
gaaaatgaaagttctgtttggttgtgcctgaaaaaaaaatttggatctgagctgtggttc
caagggaagtcacaatctgaatgcatttccgtgaaggatgcattgaagatttctattatc
aaaccactagaatcaatgttgggttgcaaatcaagcataagcactttccatgtccgtttg
acatacagtcaccctgtggcgtcaacagcaattcaaaattccataaataaaaaccagggt
tttaagagaaggaaaacaggctctggcaatggattgaaaactgttgatgatgacctaata
tgttctgatttttcaatgagtgatgtggatgtggttgtggaaaggcctttggagagttta
caagctaatgaatcatctgagagctttaaattcccctctaagttgatctctaaaccctgc
cagttggtcttctcctgctacaggacacatatctactttggtgggcgatatctgaagtac
tctagaaatgtgagtcaaacacgttggatcgttgatgacgaaagaatgggagaagcatct
gtagaggaactaatagggagcaacattcttcccatatgccatggtgatagttacaagttt
catgctgccggcagagaggatattgatgttcgaatgttgggctcaggaaggcccttcttg
gttgagattcaaaatgcacgccttatgccatctgaagattctgtaaagaatattgaaaaa
catataaataaaatggagaagaaattggttggtgtgaaaaatcttaaaatggtgggcagt
gaggggtggactctgatgcgagaaggggagtcagagaagcagaagcaatatgctgcactg
gtttggatttcccgcccacttaaggatgaagatttccaatgtatatcttcacttaaggac
atgcatatcatgcagaagaccccggtaagggtgcttcacaggcgaagtccattggcacgg
gaaaaaattatacattggatgagattggagaggatttgtggacattctcaatattttctt
ttgcatctttgtacccaggctggaacatatatcaaggaatttgttcatggggaccttggg
cgtacttaccctagcattggttcaattcttgattgtagagcagagatactgcaacttgat
gtgacagatgtgaaaatggattgttttcttacagaagaaggatacccattgctccagtgc
tag

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