Ziziphus jujuba (Chinese jujube): 107422832
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Entry
107422832 CDS
T04794
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107422832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107422832
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107422832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
YycI
Takusan
Ribonuc_P_40
VPS38
Motif
Other DBs
NCBI-GeneID:
107422832
NCBI-ProteinID:
XP_015887826
UniProt:
A0A6P4A3Q9
LinkDB
All DBs
Position
3:complement(join(24099061..24099300,24099678..24099800,24100220..24100348,24101068..24101210,24101291..24101426))
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AA seq
256 aa
AA seq
DB search
MEDTRHTCLKLQPKGAAEPIFVKGTWFHSHFDLSITDGHHAWICQASEEQVKDRAVQWDQ
PVPEYVALAERYLGFQQPGSVYGFADAGDGHKRLSWTFEKEGTKLEWRWKCQPSPNSKKT
TADIMDFLMDANIRLSEEVVRKTQSFERLKVESEKCLAQSEKLTNEKMEFESAVYAKFLA
VLNSKKAKLRELRDQLQKKNATGKLPKEEESTDKTESFDGGSDDENSEEETSENLTGTSK
DIPTSRPRGRKKMLRK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacaaggcacacatgcttgaagctccaaccaaaaggcgccgccgaacccatc
tttgtcaaagggacttggttccactcccatttcgacctctcaataactgatggccatcac
gcttggatctgccaagcatcggaggagcaagtgaaggaccgagcagttcaatgggaccag
ccggtgccggagtacgtggcgttggccgaaaggtacttagggtttcagcagcccggttcc
gtctacggctttgctgatgctggtgacggccataaaagattatcatggacttttgagaag
gaagggaccaagctggaatggcgatggaaatgtcaaccatcacctaatagtaagaaaact
acagcggatataatggactttctcatggacgcaaacataaggctaagtgaagaagttgtg
aggaaaactcaatcatttgaaaggctgaaagtggaatctgagaaatgtttagcacagagt
gagaagttaaccaatgagaagatggagtttgaatctgcagtatatgcaaagttccttgca
gtcttgaattcaaaaaaagctaagcttagagagcttcgagaccagcttcaaaagaagaat
gctactgggaaattaccaaaagaagaggagtccacagataaaactgaaagttttgatgga
ggaagcgatgacgagaatagtgaggaagagacttctgaaaatctcacaggcacttcaaaa
gatattcctacaagtaggcctcgtggtcgaaagaagatgctacggaagtaa
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