Ziziphus jujuba (Chinese jujube): 107422849
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Entry
107422849 CDS
T04794
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107422849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107422849
Spliceosome [BR:
zju03041
]
Complex C
Other components
Step II factors
107422849
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
Chromo
SH3_Tf2-1
zf-CCHC_4
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
107422849
NCBI-ProteinID:
XP_024931836
UniProt:
A0A6P6GCL6
LinkDB
All DBs
Position
3:complement(join(21997623..21997759,21998028..21998244,21998550..21998849,21998935..21999070,21999185..21999586,21999926..22000038,22000129..22000292,22003712..22004006))
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AA seq
587 aa
AA seq
DB search
MPIIAKVGRASYKVVTLGWIRVHPVFQVSNLKPYYVDKEDPAHNTPARAKDKTKLPKTTK
EVEEILAERTRSVHRQLVPEYLIKWKGLGEEETSWENEEDSNSRKDRRKKRELEEARKAG
LAPAEVDEYGKEINPHIPQYMSSAPWYLKLEKPSLTHQKNWKSDPKDTKACYDRGAKTFQ
ADKYRKGACENCGAITHDVKFCIERPRKKGAKLTNMHIAPDEKIEKVELDYDGKHDRWNG
YDTANHSRVMDRHEAMCGARRKYLKEQRHKRLEEKNNKQNGEGEVSDEDALEVDEAKIDE
SKQMDFAKVEKRVRTTSGGSTGTVRNLRIREDTAKYLSNINENSAYYDPKTRSMREDPLP
DADQDEKFYGGDNQYRESGQALEFKQLNIHAREAFEKGQDIHVQAAPSQAELLYKNYKDS
TEKLKSQMKETIMEKYGNAACEEELPRELLLGQSERQIEYNRAGRIIKALETSLPKSKYE
EDVYINNHTSIWGSWWKDHQWGYKCCKQTILNSYCTGAVGIEAAEAAIDLMNTNIDRKVA
CEDTPVLTEEKMLTTWGTDVPDLVLDQKKLVEALKKVNLYRLNLLLE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcattgccaaagtagggagggcgtcgtataaggtggttaccctaggatggata
agagtgcacccggtattccaagtcagcaacctcaagccatactacgttgacaaggaggat
ccagcgcacaacactccagcaagagccaaagacaagaccaagctgccgaagacgaccaag
gaagtggaggagatccttgcagaaagaaccagaagcgtgcatcgacagctagtaccagag
tacctcatcaagtggaagggactaggagaagaagaaaccagctgggagaatgaagaggat
tccaattctagaaaggatcgtcggaagaagcgtgaattggaggaagcgagaaaggcaggg
cttgcaccggctgaggttgatgaatatgggaaagagattaatcctcatatacctcaatat
atgtcatctgcaccttggtatcttaaattagagaaaccaagtttgacacatcaaaagaac
tggaaatcagatccgaaggacacaaaagcatgttatgatagaggggccaaaacatttcag
gctgataaatatcggaagggcgcttgtgaaaactgtggagctataacacatgatgtaaag
ttctgcattgagaggcctagaaagaaaggagcaaaattgactaacatgcacattgcacct
gatgagaagatagagaaagttgaactggattacgatggtaaacatgatagatggaatggt
tatgatacggcaaatcattctcgtgtcatggataggcatgaggcaatgtgtggggctaga
aggaaatacctgaaagaacagcggcacaaaagattagaggagaaaaacaataagcagaat
ggggaaggtgaggtcagtgatgaggatgctcttgaggttgatgaagccaagattgatgaa
agtaaacagatggattttgcaaaggttgagaagcgtgttcgtacaacaagtggtggaagc
acaggtactgttagaaatttgcgtattcgggaggacacagcaaaatatctttcaaatatc
aatgaaaattctgcttactatgatcccaaaactcggtcaatgcgagaggaccctcttcct
gatgctgaccaagatgagaagttttatggaggagataaccaatatagagaaagtgggcaa
gcattggagttcaagcaacttaatattcatgcacgggaggcatttgagaaaggccaagat
atacacgtgcaagctgctccttctcaagctgaattactgtataagaactataaggacagc
acggagaagttaaaatcacaaatgaaagaaaccataatggagaaatatggaaatgctgca
tgtgaggaagaactaccaagggagcttcttttgggacaaagtgagagacaaattgaatat
aatcgtgctggcagaattattaaagcattggagacatcccttccaaagagcaaatatgaa
gaggatgtctacatcaataaccatacaagtatctggggttcttggtggaaagatcatcaa
tggggctacaagtgctgtaagcaaacaatattgaacagttattgcactggtgcagttgga
attgaggcggctgaagcagcaattgacctcatgaacactaatatcgatcgtaaagtagct
tgtgaagatacacctgttctaacagaagagaaaatgcttactacttggggaactgatgta
cccgatttggtccttgaccagaaaaaacttgttgaagctcttaaaaaggtgaacttatat
agacttaacctgcttctagaatga
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