Ziziphus jujuba (Chinese jujube): 107423464
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Entry
107423464 CDS
T04794
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107423464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107423464
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107423464
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_14
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107423464
NCBI-ProteinID:
XP_015888519
UniProt:
A0A6P4A515
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All DBs
Position
7:complement(join(7063056..7063420,7063607..7063748,7063825..7064173,7066224..7066489))
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AA seq
373 aa
AA seq
DB search
MVGKENMRTEDLNLCFEQLMMRGGSARSGGGGKVKMEAGVITDWKDIPMELLLQIISVVD
DKTVIVASGVCRGWRDAICMGVTHLSFSWCTKNMNNLVLSLAPKFTKLQSLILRQDKAQL
EDNAVETIANFCHDLQILDLSKSFKLSDCSLYALAHGCPNLSKLNISGCSAFSDVALEYL
ASHCRKLKVLNLCGCVETATDTALRAIGRYCNQLQSLNLGWCEYVSDDGVMSLAYGCPDL
RTLDLCGCVRITDHSVIALATGCVHLRSLGLYYCQNITDRAMYSLTQVKNKPAMWASVKG
RNDEDGLRTLNISQCTALTPSAVQAVCDTFPSLHTCSGRHSLIMSGCLSLTSVHCACAIQ
AHRTPNAFPHSAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaaagaaaacatgaggacagaggacttgaatctgtgctttgagcagctgatg
atgcgcggtggtagcgctcgcagtggtggtggtgggaaagtgaaaatggaagctggagtt
attactgactggaaggatatccctatggagctcctgttgcaaatcatttccgtcgtcgac
gataagacggtgatcgtggcttctggggtctgtcgtgggtggagagatgctatttgcatg
ggtgttacccatctttctttttcatggtgcacgaagaacatgaacaacttggtcttatct
cttgctcctaaattcacgaaattgcagagtctgattctgcgccaggataaagcacaactt
gaggataatgctgttgagactatagcaaatttctgtcatgatttgcagatcctggaccta
agcaaaagcttcaagcttagtgattgctccctatatgccttagcacatggttgtccaaac
ctttcaaaactcaatatcagtggatgctctgcattcagtgacgttgctcttgaatatctg
gctagtcactgcagaaaactaaaagttttaaatctttgtggatgtgtcgagactgcaaca
gacacagcattgcgggctatcgggcgttactgcaatcagttgcagtctttgaatcttgga
tggtgtgagtatgtgagtgatgatggagttatgagtttggcatatggatgccctgatctc
agaacccttgatttatgtggctgtgttcgtataacagatcatagtgtgattgctctggca
actggatgtgttcatctgagatcccttggcctgtactattgtcagaacatcacagacaga
gcaatgtattccttgactcaagtgaagaacaagcctgcaatgtgggcatctgtgaaaggc
aggaatgatgaagatgggctaaggactctcaacatcagccagtgcacggcgcttacccct
tcggctgttcaggcagtgtgcgacacatttccttcacttcacacctgctctgggaggcat
tctctcatcatgagtggatgtttgagcttaacttccgtgcattgcgcctgtgctatccaa
gcacaccgcactcctaatgcttttccccattcagctcattga
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