KEGG   Ziziphus jujuba (Chinese jujube): 107423660
Entry
107423660         CDS       T04794                                 
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
  KO
K03255  protein TIF31
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:zju03012]
    107423660
Translation factors [BR:zju03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    107423660
SSDB
Motif
Pfam: TPR_10 TPR_12 eIF3_p135 TPR_NPHP3 CLU_N TPR_2 TPR_MalT TPR_9 CLU TPR_8
Other DBs
NCBI-GeneID: 107423660
NCBI-ProteinID: XP_060675089
UniProt: A0ABM4AEC8
LinkDB
Position
7:complement(join(3163152..3165341,3165657..3165744,3165842..3165954,3166096..3166227,3166337..3166520,3166601..3166734,3166903..3167007,3167079..3167180,3167284..3167376,3167591..3167908,3168064..3168165,3168257..3168319,3168435..3168963,3169052..3169209,3169363..3169887,3169994..3170035,3170167..3170298,3170434..3170501,3170666..3170983,3171119..3171191,3171752..3171844,3172413..3172474,3172606..3172666))
AA seq 1894 aa
MAPRNSRGKARGEKKKKEEKILPVVMDITVNLPDETHVILKGISTDRIIDVRRLLSVNTE
TCSITNFSLSHEVRGPRLKDTVDVSALKPCILTLVEEEYDDDRATAHVRRVLDLVACTTS
FGPSSSSKDQNSKPDPPNSAAGAKNALGVQDKNAKKSSTTKSQGLSGANTEVDTVAEMSH
SLPKLGSFYEFFSLSHLTPPIQFIKKVAKRAVNEISADDHLFSLEVKLCNGKVVHVEACR
KGFYSVGKQRILCHNLVDLLRQLSRAFDNAFEDLMKAFSERNKFGNLPYGFRSNTWLVPH
IAAQSPSIFPSLPVEDGTWGGNGGGLGRDGKCDLIPWSSEFFHIASMPCKTAEERQIRDR
KAFLLHSLFVDVSIFKAIRVIQHVMDKPELTGSVSSSKILHTERVGDLSITVMKDASNAS
SKIDTKIDGVQAIGVEQKNLVERNLLKGITADENTAAHDVATLGVVNVRYCGYIAVVKVE
DKENKEVKSLSQRMELFDQPEGGANALNINSLRLLLHKTPTSEHNKPLPDVQIVEREELS
EASTFVERLLEESLAKLEKEDLKADQFVRWELGACWIQHLQDQKNTEKDKKPSSEKTKNE
MKVEGLGTPLRSLKNKKKSDGSNAKTQSENSKTSIHAVTGEAENAISPCTEHQHEINAKE
NELVLKSLLSDAAFARLKESETGLHCKSLQELIDLSQKYYLDVALPKLVADFGSLELSPV
DGRTLTDFMHTRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVISAVEDAE
KMAVSIAAALNLMLGIPESDKLNKSCDVHSLVWRWLEVFLRKRYEWDLNNFNYRDVRKFA
ILRGLCHKVGIELVPRDFDLDSPNPFRKSDVVSLVPVHKQAACSSADGRQLLESSKTALD
KGKLEDAVAYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDIN
ERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINV
AMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQ
TTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDL
LDYINPSHDAKGRDVAVRRKSNIAKLKGKSYQAVSSASSDESQKETPKEASDEEMQIPES
TDSTDAIQEISSPSVQLQETLVQGTTGDKPSIANEILSEALAEGEDGWQPVQRPRSAGSY
GRRLKQRRATIGKVYGYQKKQVDADSDYPSAKNNHQNSRYYLLKKRTASHGSYSDHHTTN
PSQGTKFGRRIVKAVTYRVKSMPSSTKTATTETSQNGNQVSSSTIEPGRPALLNEIGPLK
NPIVGLGKSPSYKEVALAPPGSIAKMPAGVSQNDVPDNLEHGFDKHEEETNEGRGNDEPK
KEGSRNDEPVITGVEDIIEEEDKNSILNHTDQSKEETGVDEKKEETHSTNASDEKKEETH
STNASDEKPSLMVSESMDGLGSGSISVPDVVEDNTLIDGVQNSYDSPKEGLQEKDSSGSF
ELHVNSNNASQGAEDLKDKSFIVNPIDSRALTNKKLSASAAPFNPSPGIARAAPVSMNIT
LPAGPAVPTIAPWPVNMNIHAGPAAVLSTVNPMCSSPHHPYPSPPTTPNMIQPLPFMYPP
YTQPQAVPTSTFPVTSSAFHLNNFTWQCNVNPNVPEFVPGTVWPGCHPVEFTVPPPVVNP
IAEPGLEPRVQSDDSAPILPADIENVEEMNKEVKPPASVAIGNANEVGAGPQNVKENGLS
NLDGTENAENGPNNSPHENAGSSGERKTDGEKTFSILIRGRRNRKQTLRMPISLLSRPYG
SQSFKVICNRVVRGNDAPNSTNFSSTEDLTATAT
NT seq 5685 nt   +upstreamnt  +downstreamnt
atggcacccaggaacagtcgcggaaaagccagaggagagaagaagaagaaagaagaaaag
attcttcctgttgttatggacatcactgtgaaccttcccgatgaaacccatgttatttta
aagggaatatcaacggacaggataatcgatgttcgccgattgttatccgtgaacacagaa
acttgcagcattactaatttttcactatcccatgaggtgagagggccacgcttaaaagat
acggtggacgtgtccgcactaaaaccatgcatcctgacgttggttgaagaggaatacgat
gacgatcgcgccacggcgcacgttagacgtgtactggacctcgtcgcctgcacgacgagc
ttcggcccatcgtcgtcgagcaaggatcaaaactctaagcccgatcctcctaattcagcc
gccggcgctaagaatgcgctgggtgtgcaggataagaacgctaagaaatcttctaccacc
aagtctcaaggcctttccggagccaatacggaggtggatactgtggccgaaatgagccac
tcgttacctaagctcggttccttctatgagttcttttcactctcacatctcactccccca
attcagtttataaagaaggtggcgaaacgggcagtcaatgagatttcggcggatgatcat
cttttttctctcgaagtgaaactttgcaatgggaaggtagttcatgtggaagcttgcagg
aagggattctatagcgttgggaagcagcgaattctgtgtcacaacctcgttgatttgtta
cgccagcttagtagagcttttgataatgcttttgaggatctcatgaaagcattctcagag
cgtaacaagtttggcaatcttccttatggcttcaggtccaacacctggcttgtcccacat
attgcagcccaatcgccgtcaatcttcccttctctcccagtagaggatggtacttgggga
ggaaatggaggtggtctaggaagagatggaaaatgcgacctaataccctggtctagtgag
ttttttcacattgcatccatgccttgtaagactgctgaggaaaggcaaattcgtgatcga
aaggcattccttcttcacagcctatttgttgacgtctccattttcaaagctatcagagtc
atccagcatgtaatggacaaaccagagttaaccggttcagtatcgagcagtaaaattctt
cataccgaaagagtgggtgacttgagcatcacagtcatgaaagatgcatccaatgcaagt
tctaagatagatactaaaattgatggagttcaagcaattggagtggagcagaagaatcta
gtagaaagaaatcttctgaaagggatcactgctgatgaaaataccgctgcccatgatgtt
gcaactctaggtgttgtcaatgtaagatattgtggttacattgcagttgtgaaagttgag
gataaagaaaataaggaggtcaaatctctatcccaaagaatggaactttttgatcagcct
gaaggtggtgcaaatgccctaaatattaacagtttgagattactacttcacaaaactcca
acttcagagcacaacaagcctttaccggatgtacaaattgtggaacgtgaagagctttct
gaagcctctacttttgttgaaagattgttagaagaaagtcttgctaaacttgagaaagag
gacctcaaagcagaccaatttgtaagatgggaacttggagcctgctggatacaacacttg
caagaccaaaaaaatacagaaaaagataaaaaaccatccagtgagaagactaaaaatgag
atgaaggttgagggacttgggacacctcttaggtccctgaagaacaagaaaaaatctgat
ggaagcaatgcaaaaacacaatccgagaactcaaagacctccattcatgctgttactggg
gaagctgaaaatgccatatcaccttgcacagaacatcagcatgaaatcaatgccaaggaa
aatgagcttgtactgaagagtttgttgtccgatgcagcatttgctcgactaaaggaatct
gaaactggacttcattgcaagtctcttcaagaactaattgacttatcccagaagtattac
ttggatgttgctcttccaaaactggtagcagattttggttcattagaattgtcaccagtt
gatggtcggactttgaccgatttcatgcacactagaggtcttcagatgcgttcactggga
catgttgtcaagctttcagagaagttatcccatgtgcagtcactttgcattcatgagatg
atagtacgagcttttaagcacatccttcaggcagtaatttcagctgttgaagatgctgag
aaaatggctgtatcaatagctgctgcattaaacctaatgcttgggattcctgagagcgat
aaattaaataagtcttgcgatgtccattctcttgtgtggagatggctggaggtattcttg
agaaagcgatatgaatgggatcttaataacttcaactacagagatgtaaggaaatttgca
attctacgtggactatgccataaggttggaattgagttggttccaagggattttgacctg
gattctccaaatccattccgaaaatcagatgttgtcagcctggtcccggtgcacaagcaa
gctgcatgctcttctgcagatgggaggcagctactggaatcatcaaaaacagctttagat
aagggaaaacttgaagatgcagttgcctatgggacaaaggctcttgcaaagcttgtagca
gtttgtggtccgtaccatcgaatgacagcaggagcttatagcctccttgcagtagtttta
tatcacactggagacttcaatcaggctacaatttaccagcaaaaggcactagatatcaat
gaaagagaattaggacttgatcatccagatacaatgaagagttatggagaccttgctgtg
ttctattatagacttcaacatacagagttggctctcaagtatgtaaagcgtgctctgtat
cttttgcatctgacatgtggtccatctcatcccaacactgctgcaacatacatcaacgtg
gccatgatggaagaaggcctagggaatgttcatgttgcccttagatatcttcataaggct
ctcaagtgtaatcagaggttgcttggcccagaccatattcagacagcagcaagctaccat
gctattgcaattgcactctcattgatggaagcataccctttgagcgttcagcatgaacaa
acaaccttgcaaattctccgagcaaagctcggccctgatgacctgcgtacacaggatgct
gctgcttggcttgagtattttgaatccaaggcttttgaacagcaagaagctgcacgaaac
ggtactcggaagcctgatgcgtctatagccagcaaaggccacttaagtgtatcagattta
cttgattatattaatccaagtcatgatgctaaagggagagatgtagcagttagaaggaaa
agcaacattgccaagctcaagggaaaatcctaccaagcagtaagctcggcaagttctgat
gagtctcaaaaagaaacaccaaaggaggcttcagatgaagagatgcaaattcctgaatca
acagacagcacagatgccatccaggagattagctctccatctgttcagctccaggagact
cttgtacaaggaactacaggtgataaaccaagtattgccaatgagatactttctgaagca
cttgccgaaggagaagatggatggcaaccggttcaaaggcctagatcagctggctcttat
gggcgacgtctaaagcaacggcgggcaactattggcaaagtctatggttaccagaagaaa
caagttgatgctgatagtgactatccttctgcgaagaataatcatcagaatagtaggtat
taccttttaaagaaaaggacagcatctcatggaagttattctgatcaccacactacaaat
ccctcccaaggtactaaatttggacggagaatagttaaagctgtaacctacagggtcaag
tcaatgccttcatctaccaaaactgctacaacagagacctctcaaaatggtaatcaggtt
tccagttccacaatagaacctggacgacctgctttgttgaacgagattggtccactgaaa
aatcctattgttggtcttggaaaatctccttcatacaaggaagtagcattggcgccacca
ggtagtattgctaagatgccagctggggtatcccaaaatgatgttccggacaacttggag
catggttttgataaacatgaagaggaaacaaatgaaggaagaggaaatgatgaaccaaaa
aaagaaggaagcagaaatgatgaaccagtcataacaggggtagaggatataattgaagag
gaggataagaattctatattgaatcatacggatcaatcaaaagaggaaaccggagttgat
gagaagaaagaagagacccattcaactaatgcatcggatgagaagaaagaagagacccat
tcaactaatgcatcagatgaaaaaccttctctgatggtgtctgagagcatggatggactt
ggatccggtagcataagtgttcctgatgtggtagaagataacacattgatagatggggta
caaaattcttatgattctcccaaggagggactccaggagaaggattcatctggcagtttc
gaactgcatgtcaattccaacaatgcctcacaaggagcagaggacttgaaggacaaatcc
ttcattgtaaatccaattgatagtcgtgcacttaccaataagaagttgtctgcatctgca
gctccttttaatccctcaccaggcattgctcgtgctgcaccagtttccatgaacattact
cttcctgctggtcctgctgtcccaactattgcaccttggcctgtaaacatgaatattcat
gcaggacctgctgctgtactatccacagttaatccaatgtgctcatcccctcatcatcca
tacccatctcctccaacaacgccaaacatgatacagccattgccctttatgtacccacct
tatactcagccccaagcagttccaaccagtacctttcctgtaacaagcagtgcatttcat
ctcaataatttcacatggcagtgcaatgtgaatcctaatgtaccagagtttgttcctggc
acagtgtggcctggttgccatccagtggaattcactgttccaccacctgttgttaatcca
attgctgaacctgggctagagccaagagttcagtctgatgattctgcaccaattcttcca
gcagacattgaaaatgtggaggaaatgaataaagaagtgaaacctccagcatcagtggca
attggtaatgcgaatgaagttggtgctggaccacagaatgtaaaggaaaacggtctttca
aatctggatgggactgaaaatgctgagaatggaccaaataacagtccacatgaaaatgct
ggaagcagtggagaaaggaagactgatggtgaaaaaaccttcagcattttgataaggggt
agaagaaaccgaaaacagactctgaggatgcctataagtttgctcagtcgaccatatggt
tcccagtccttcaaagttatatgcaacagagtagttaggggaaatgatgctcccaattct
actaacttctcttcaactgaggatttgaccgccactgctacttaa

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