Ziziphus jujuba (Chinese jujube): 107423826
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Entry
107423826 CDS
T04794
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL
KO
K12133
MYB-related transcription factor LHY
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107423826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107423826
Transcription factors [BR:
zju03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
107423826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
107423826
NCBI-ProteinID:
XP_048335975
LinkDB
All DBs
Position
7:complement(join(2203707..2204126,2204234..2205703,2205844..2206068,2208023..2208084,2208349..2208460,2208594..2208632))
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AA seq
775 aa
AA seq
DB search
MDTYSSGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEALVKGVPIGQTLDIDIPPPRPKRKPSNPYPRKTSAAIPTSHVGVK
DVKLLPSESSSHCKQVLDLEKEPIPERPGGEEDPTNEKENPTNEKENQDENCSEVFTMLQ
EAHYSSISSANRNSMPSPVALRNACTFREFVPSSKQANQDESNGSYVTIEHQGNQNLEKV
NAKQRAVQDNATNRGSKFDNSNSPLEELVQNEKRNDLNCEMPTEELQTTQNYPRHVPVHV
LDGSLGNCTQTPSADISFRDPIFHPIGEVPGHPTVFPNPAASATTEHQSNVSRSSVHQSF
PPFHPTFTPIRHDQDEYRSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANMETS
ADSPACPHGGFPSRQMNSTPSMAAITAATVAAATAWWAAHGLLPLCAPLHTGFACAPAST
SVPSMDTGQALAAKTERGENSPNPPLQDQLDVEHSEALQSQHSASKSPTQSSTESEESGA
AKPDTCLKAADDEKATAEPDLHDSNPVKSRKQVDRSSCGSNTASSSEVETDALEKHDKGK
EELKESDKNHPATESTNRRIRSTSTLIDSWKEVSEEGRLAFQALFSREVLPQSFSPPRDI
LNKKENQNNSAEGDKQNVEEKGGDTLLLDLNRRILLSRSIQQEVEKNASSRSDTNGDEGL
LTIGLGHGKLKTRRTGFKPYKRCSVEAKENRVGSAGCQGEEKGPKRLRLEGEAST
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggacacatattcctccggtgaagatttggttattaagacaagaaagccatatactatt
acaaagcaacgagagcgatggacagaggaggagcataacaggtttcttgaagccctgaag
ctttatgggcgagcttggcagcgcatagaagagcatataggaacaaagactgctgtgcag
atcagaagtcatgcacagaaattcttttcaaagttggagaaggaggctctcgttaaaggt
gttcctataggacaaactcttgacatagatattccacctccacgtcctaaaaggaaacca
agcaatccttatcctcgaaagaccagtgcagctattcccacatcacatgtgggagtgaaa
gatgtgaaacttttgccatcagagtcttcttcacattgtaagcaagtactagatctggag
aaagagccaattcctgagagacctggtggagaagaagatcctacaaatgaaaaagaaaat
cctacaaatgaaaaagaaaatcaagatgaaaattgctcagaagtttttaccatgcttcaa
gaagctcactattcttctatttcttcagcaaatagaaactccatgccttcacctgtggca
ctcagaaatgcttgcacttttagggagtttgttccttcaagcaagcaggcaaatcaggat
gaatcaaatggatcatatgtaactattgaacatcaaggaaatcaaaatttggagaaagtt
aatgccaaacagagagcagttcaggataatgccacaaatagaggatcgaagtttgacaac
tctaattctccactggaggagttggtccagaatgagaaaagaaatgatttaaattgtgag
atgccaacagaggagctgcaaacaactcagaactacccaaggcatgtgcctgtgcatgtt
ctagatgggagcctaggaaattgcactcaaactccttctgcagatatttcattccgagac
cccatctttcatccaattggtgaggttcctggacaccctacagtgtttccaaatccagct
gcatctgctactactgaacatcagagcaatgtatcaagatcttcagttcatcaatcattt
ccaccatttcatcctacctttactccaattcgtcatgatcaagatgagtaccgatcattt
ctccaaatgtcctctacgttttcgagtcttattgtatctacattgctgcaaaaccctgca
gcacatgctgcagcgagctttgcagctacattttggccttatgcaaatatggaaacttca
gcagattctcctgcatgcccccatggtggatttccttctagacaaatgaactcaactcca
agtatggcagcaattactgctgctactgtagcagcagccactgcatggtgggcagcccat
ggactgcttcctttgtgtgctcctcttcacactggatttgcctgtgctcctgcatccaca
agtgttccatcaatggacactggtcaagctcttgcagccaagactgaaagaggagagaat
tctcctaatcctcccttgcaagatcaactggacgtagaacactcggaagctttgcaatct
caacattcagcttctaaatctcccacccagtcatcaacagagtctgaggagagtggggct
gcaaagcctgatacctgtttaaaagctgctgatgatgagaaggccacagcagaacctgat
cttcatgattcaaatccggtgaagagcagaaaacaggtggaccgttcatcatgtggttct
aacacagcttccagcagtgaagtagagactgatgcgttggagaagcatgacaaagggaag
gaagagttaaaagaatcggataaaaatcatccagccactgagtccactaaccgtcgtatt
agaagcaccagcactctgattgattcttggaaggaggtgtctgaagaggggagactggca
tttcaagcactattctcaagagaggtattaccccaaagtttttcacctccacgtgatatc
ctgaataaaaaagagaatcaaaacaacagtgcggaaggagataagcagaatgtagaagaa
aaaggtggagatacgttgctattggacctgaatagaaggatattgctgtctcgttccatc
caacaagaagtggagaaaaatgcatcatcaagaagtgacaccaatggggatgagggactg
ttgacaatagggcttggacatggaaagctcaagactcgccgaacaggattcaaaccttac
aaaaggtgctcagtagaagccaaggaaaacagggtgggaagtgccggctgccaaggcgag
gagaaaggcccgaagaggttgcgcttggaaggggaagcttcaacttga
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integrated database retrieval system
