KEGG   Ziziphus jujuba (Chinese jujube): 107423843
Entry
107423843         CDS       T04794                                 
Name
(RefSeq) endoribonuclease Dicer homolog 1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107423843
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107423843
   microRNA pathway
    RISC loading complex
     107423843
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ dsrm DND1_DSRM DEAD Helicase_C ResIII Dicer_dsRBD SNF2-rel_dom SLFN-g3_helicase Dicer_PBD SWI2_SNF2 Cas3-like_C_2
Other DBs
NCBI-GeneID: 107423843
NCBI-ProteinID: XP_015888972
UniProt: A0A6P4A6B9
LinkDB
Position
7:join(2176667..2177902,2178024..2178137,2178971..2179181,2179384..2179778,2179893..2180124,2180635..2180807,2180905..2181027,2181126..2181286,2181453..2181686,2181772..2181922,2182008..2182190,2182515..2182676,2182753..2182848,2182949..2183577,2183876..2183976,2184062..2184252,2184330..2185250,2185365..2185529,2185620..2186002,2186105..2186285)
AA seq 2013 aa
MADEARVSNNPIPIRSLGTEEVRPSYWLDACEDISCDLIGGLVDFGDTSIAPDSTANREA
ENCNQEEDGLVNDFFGGLDHILDSIKNGAGLPSLQDFNSLADTITPTAFGNGTRSCSVGE
ACLQNGGASGISKAVVQVEGSIAAPNGTITNQNGGRNSEFNGEAGRGIKLVNGNGEHKQH
RRQHEVSENGLQKYENVNPNEVVARGRDVESDERCSMRARYGNCKNDKYCLGRGQYHPRE
RERERERCFSRKRPRDLDDIDRRDRDYVRRKEHYSNNRRDGRDRDWRDREPKGYWERDKS
GSNEMVFRIGSYEGDRHREGKVANDKNQECNGKAENKPEEPKETIPEEQARKYQLDVLEQ
AKNKNTIAFLETGAGKTLIAVLLIRSLFNDLQKQNKKLLAVFLVPKVPLVYQQAEAIRER
TGYQVGHYCGEMGQDFWDSRRWQREFDSKQVLVMTAQILLNILRHSIIKMEAINLLILDE
CHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSNQVDCAIKIRNLESKLD
SIVCTVKDRKELEKHVPMPSERVVEYDKAATLWSLHEQIKQMEIEVEEAAKASSRRSKWQ
FMGARDAGAKEEMRQVYGVSERTESDGAVNLIQKLRAVNYALGELGQWCAYKVALSFLTA
LQNDERANYQLDVKFQESYLSKAVSLLQCHLSEGAVSDKETKVTNSENEVPEEGSAPDDI
EEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLTYQHTEDFRAIIFVERVV
SALVLPKVFAELPSLSFVKCASLIGHNNSQEMRSCQMQDTIAKFRDGRVTLLVATSVAEE
GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHEAFLRNARNSEET
LRKEAIERTDLSTLKDTSRLISVDLTPGTMYQVETTGAVVSLNSAVGLIHFYCSQLPSDR
YSILRPEFVMVRHEKPGGPTEYSCKLQLPCNAPFETLEGPICSSMRLAQQAVCLAACKKL
HEMGAFTDMLLPDKGSGEEIEKVDQNDEGDPLPGTARHREFYPEGVANILQGEWILYGRD
VCDNSKLLRLYMYAVKCVNIGSSKDPFLTQVSEFAVLFGNELDAEVLSMSMDLFIARTMT
TKSSLVFRGSIDITQNELASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDNS
VDPIREIDWDLVKKIINTDAWCNPLQRARPDVYLGTNERTLGGDRREYGFGKLRNGMAFG
QKSHPTYGIRGAVAQYDVVKASGLVPNRNALEMQRHVDLSKGKLMMADTCTTAEDLVGKI
VTAAHSGKRFYVDSIRYDMTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELAYKRQPLI
RGRGVSYCKNLLSPRFEHAEGESEETLDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIM
RRVESMLLAVQLRDVINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF
LKYPQKHEGQLTRMRQQMVSNMVLYHYALSKGLQSYIQADRYAPSRWAAPGVLPVFDEDI
KDGESSLFDQERSLADTVHQTDHPGDGYEDDEMEDGELESDSSSYRVLSSKTLADVVEAL
IGVYYVEGGKHAAKHLMKWIGIEVEFDPDEIGCSTKPSYVPESILRSVSFDALEGALNIR
FKERGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRA
AAVNNENFARVAVKHNLHMHLRHGSNALERQIRDFVKEVQSELSKPGFNSFGLGDCKAPK
VLGDIVESIAGAVFLDSGHDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGL
EYKATRSGNLATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKAKESAEAKDKDDDD
DDTGKKKKNGSQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDRGW
TDECVGEPMPSVKKAKDSAAVLLLELLNKLYSS
NT seq 6042 nt   +upstreamnt  +downstreamnt
atggcggatgaagctagggtttcaaacaaccctatacctattcgttccttgggtacggag
gaggtgagaccttcttactggctagacgcttgcgaagatatttcctgcgacctaatcggc
ggtttggtggatttcggtgatacttcaattgcgcccgactccacggcaaaccgcgaagct
gaaaattgcaatcaggaggaggacggacttgttaacgatttcttcggagggctggatcac
attctcgatagtataaaaaatggagctggacttccttcgctgcaggacttcaatagcctt
gctgatactattactcctacggcctttggcaatgggacacgaagttgcagcgtcggggaa
gcttgcttacagaatggtggggcgtcagggatttccaaggccgtggtgcaggttgagggc
tcgattgccgcacctaatggtaccattaccaaccaaaatggtggccggaattccgagttt
aatggtgaagctggccgtgggattaagttggtcaatggaaatggggaacacaagcagcat
cgccgccagcacgaggttagtgaaaatggacttcagaagtatgagaacgtgaatcccaat
gaggttgttgcgaggggaagagatgtggaaagtgatgaaagatgcagcatgagagctcga
tatggcaactgcaagaacgataagtattgcttgggaagaggacaatatcatcccagggag
agggaaagggaaagggaaagatgctttagcaggaaaaggccgcgcgatttggacgatatt
gataggagggatagggactatgttaggagaaaagagcattacagtaacaatagaagggat
ggaagagacagggattggagggatagggaaccaaagggttattgggagagggataagtca
gggtccaatgagatggttttccgcattggtagctatgaaggtgataggcatagagagggg
aaggtagctaatgataaaaaccaggaatgcaatggaaaagcagagaataaacctgaagaa
cctaaagaaacaatacctgaggagcaggcccggaaatatcaattggacgtccttgaacaa
gctaagaacaaaaacactatagctttccttgaaacaggggctgggaagacactcattgct
gtcctcctcatcaggagccttttcaatgatttgcaaaagcaaaacaagaagttgctagct
gtatttctagtacctaaggttccacttgtttatcagcaagcagaagctatacgtgagcga
actggctatcaagtgggccattattgtggtgaaatgggtcaagatttctgggattctcga
agatggcagcgagagttcgattcaaagcaggtgctagttatgacagctcaaattctacta
aacattctgaggcacagtataataaagatggaagccataaatctcttgattctagacgag
tgtcatcatgctgtgaagaaacatccatattctttggtgatgtctgagttctatcataca
actccaaaggagaagagaccttctgtatttggaatgactgcttctcctgttaacttaaag
ggtgtttccaaccaagtagattgtgcaataaagattcgtaatcttgaaagcaaactagat
tccatagtttgcactgtaaaagaccgtaaagagctggaaaaacatgttccaatgccctcg
gaaagagtagtggagtatgacaaagcagctaccttatggtcccttcacgaacagataaaa
caaatggaaattgaagttgaagaagctgcaaaggctagctctagaagaagtaaatggcaa
tttatgggagccagagatgctggggccaaggaagagatgcgacaagtttatggtgtgtca
gaaagaacagaaagtgatggggcagttaatttaattcaaaagttaagagccgtcaattat
gctcttggtgaattgggtcagtggtgtgcatacaaggttgcactatctttcttgacggct
ttacaaaatgatgagagggcaaattaccagctagatgtcaagtttcaagaatcctacctg
agtaaagctgtatctctcttgcaatgccatttatcagaaggagctgtttccgacaaggaa
acaaaagttacaaactcagagaatgaagtccctgaagagggaagtgcccctgatgacatt
gaggagggagagcttcctgacagtcatgttgtctcaggtggggagcatgtggatgtgatt
ataggagccgctgtagctgatggaaaagtgaccccaaaggtgcagtcactaattaaaata
cttcttacatatcagcacactgaagattttcgtgcaatcatctttgttgagcgagttgtg
tcagctttggttcttcctaaggtctttgcagagcttccgtctctgagttttgttaagtgt
gcaagtttgattggtcataacaatagtcaggaaatgcggagttgccaaatgcaggacaca
attgcgaaattccgggatggccgtgttacattgttagttgccactagtgttgctgaggaa
ggacttgatattcggcaatgtaatgttgttattcgctttgaccttgcaaaaactgttttg
gcttacattcagtctaggggccgtgcaagaaagcctgggtcggattacatcttgatggtt
gagaggggaaatctgtcccatgaagccttcttaaggaatgccaggaatagtgaggagact
ttacgtaaagaagcaattgagagaactgacctgagtactctaaaggacacttcaaggcta
atttcagtggatttaacaccgggtacaatgtatcaggtggagacaacaggtgctgttgtg
agcttaaactctgctgttggactcatccatttctactgctctcagctgcctagtgatagg
tattcaatacttcgtcccgagtttgttatggtgaggcatgagaagccaggaggtcccact
gaatattcatgcaagcttcaacttccttgcaatgcgccatttgagacccttgagggtcct
atatgcagttcaatgcgccttgctcaacaggctgtatgcttggctgcttgcaagaagctc
catgagatgggagcatttactgacatgctcttgccagacaagggaagtggggaagaaata
gaaaaggtagatcagaatgatgaaggagatccacttcctgggactgctaggcacagagag
ttctatcctgaaggtgtagctaatattctccagggtgaatggatcttatatggaagagat
gtttgtgacaattccaaactgcttcgtctctacatgtatgcagtgaaatgtgtaaacata
ggctcttctaaagatccattcttgactcaggtttcagaatttgctgtgctttttggcaat
gagctggatgcagaggtcttatcgatgtcgatggatctatttatcgctcgaaccatgact
acaaagtcttctcttgtcttcagggggtcaatagatatcacacagaatgagttggcatcc
cttaagagttttcatgtacgattgatgagcattgtactggatgtggatgttgaaccttcc
accactccttgggatcctgcaaaggcatatttgtttgtccctatggttggcgataattct
gtagatcctattagggaaattgactgggatctggttaaaaaaataattaatacagatgca
tggtgcaatccccttcaaagagctcgaccagatgtttaccttggcacaaatgaacgaaca
ttagggggagatagaagggagtatgggtttgggaaattgcgtaatggcatggcttttggg
cagaaatcccatcccacatatgggattagaggagctgtggcacaatatgatgttgtgaag
gcttccggactggttcctaatcggaatgcccttgaaatgcaaaggcatgtggatttgtcc
aaaggcaaactgatgatggcggatacttgtaccactgcagaagatttggttgggaaaatt
gtaactgctgctcactcagggaaaaggttttatgtagattcaatacgctatgatatgact
gcagagaactctttcccaaggaaggaaggctatcttggccctctggagtacagctcatat
gctgattactacaagcaaaagtatggagttgagttagcgtataagcgacagcctcttata
agaggacgaggtgtctcgtactgtaagaatcttctgtctcctcgatttgaacatgctgaa
ggtgaatctgaggagactcttgacaaaacatactatgtatttcttcctcctgagttgtgt
ttagtacacccactgcctggatcacttgttcgtggagcccagcgattaccctcaataatg
aggagggttgaaagcatgcttcttgctgtgcagctcagggatgtaatcaactaccctgtc
cctgcttcaaagatcttggaagccttgactgctgcttcatgccaggagacattttgctat
gaaagagcagagcttctgggtgatgcttacctgaaatgggtagttagtagatttcttttt
cttaaataccctcaaaaacatgaaggtcagcttactagaatgaggcaacaaatggtgagc
aatatggttctatatcattatgctttgagtaaaggacttcaatcatatatccaagcagat
cgctatgctccatctcgatgggctgctcctggggtgttgcctgtctttgatgaggatatc
aaagatggagaatcatccttatttgatcaggagagatcacttgctgatactgtacatcaa
acagatcatccgggagatggatatgaggatgatgaaatggaggatggtgagcttgagagc
gattctagttcttacagagttctatcaagcaagacacttgcagatgttgttgaagcactt
attggggtttattacgtagaaggtgggaagcatgctgctaaacaccttatgaaatggatt
ggaattgaggtagagtttgatcctgatgaaataggatgctcaacaaagccatcctatgtt
ccagagagtatacttaggagtgtcagctttgatgccttggaaggtgctttaaacataagg
tttaaagagaggggcctgttggtggaagccattacccatgcttcccgaccatcttctgga
gtatcctgctatcaacgattggagtttgttggtgatgcagtcttagatcatctcattaca
aggcatttgttcttcacatacacaaatctgcctccaggccggttgactgacctgagagct
gctgctgtaaacaatgaaaattttgcacgtgtagctgtgaaacataatctccatatgcac
cttcgccatggctcaaatgcccttgaaagacagattcgagattttgtgaaggaagttcaa
tccgaattgtcaaagccagggttcaactcttttggtctgggagattgcaaagctccaaaa
gttcttggtgacattgttgaatctattgcgggtgctgtatttcttgacagtggccatgat
actgctgttgtctggagggtgtttcaacctctgttgcatccaatggttactccggagaca
ctcccaatgcatcctgtgcgtgagctgcaagagcgatgtcagcaacaggcagaagggtta
gaatataaagccactcgaagtggcaatttagccacagttgaagtgttcattgatggtgtc
caggtaggagttgctcagaatccacagaaaaagatggcacagaaactagcagcgaggaat
gcacttgctgcattgaaagcgaaggagagtgcagaagcaaaagacaaggatgatgatgat
gatgatactgggaagaagaaaaagaatggcagccaaacatttacaagacaaacgttgaat
gatatatgcttacgtcgaaattggcccatgccattctatcggtgtgtgaatgagggtgga
cctgcacatgccaagagattcacgtttgctgtacgtgtgaatacgactgaccggggctgg
accgatgagtgtgtgggagagcctatgccaagtgtcaagaaggccaaggactctgccgca
gttcttctcttggaacttttaaataagttgtactcatcatga

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