Ziziphus jujuba (Chinese jujube): 107423893
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Entry
107423893 CDS
T04794
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107423893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107423893
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107423893
mRNA degradation factors
5'-3' decay
Lsm complex
107423893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
107423893
NCBI-ProteinID:
XP_048335021
UniProt:
A0A6P4AK35
LinkDB
All DBs
Position
7:join(1740012..1740072,1741054..1741122,1741244..1741359,1741457..1741519,1742139..1742216)
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AA seq
128 aa
AA seq
DB search
MSWTGAEDVFLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL
YCDIQLGLYVIRGENVVLIGELDSDKEELPPHMTQVSEADIRKAQKAEKDATDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggactggtgcagaggacgtttttctttccacttcgcttgcaagctatcttgac
aagaaacttcttgtcttgttacgagatggtcgaaagctcttggggttactacgatctttt
gatcaatttgctaatgttgttcttgaaggtgcgtgtgaacgagttattgttggtgatctt
tactgtgatatccaattaggtctgtatgtgatccgtggggagaatgttgtcttaatcggc
gagctggactcggataaggaggagcttcccccacatatgactcaggtgtcagaagcggat
ataagaaaggctcagaaagcagaaaaggatgctacagatctgaagggaactatgagaaaa
agaatggagttccttgattttgattaa
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integrated database retrieval system
