Ziziphus jujuba (Chinese jujube): 107424365
Help
Entry
107424365 CDS
T04794
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107424365
Enzymes [BR:
zju01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107424365
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107424365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
107424365
NCBI-ProteinID:
XP_015889636
UniProt:
A0A6P4A3F8
LinkDB
All DBs
Position
7:complement(join(9438717..9438863,9439124..9439830,9440353..9440504,9440595..9440795,9441040..9441120,9441260..9441375,9441534..9441619,9441790..9442008,9442108..9442327))
Genome browser
AA seq
642 aa
AA seq
DB search
MKIVTYNVNGLRPRISQYGSLLKLLDSFDADIICFQETKLRRQELTADLVMAEGYESFFS
CTRTCEKGRSGYSGVATFCRVKSAFSSTEVALPVAAEQGFTGLIGNSEPGREKTPEIAPG
LEEFARDELLKVDSEGRCVITDHGHFVLFNLYGPRAESDDLERIEFKLKFFKILQKRWET
LLSQGRRIFVVGDLNIAPTSLDRCEAAPDFENNEFRRWFRSMLLESGGPFYDVFRAKHPD
RVGAYTCWPQNTGAEEFNYGTRIDHILCAGSCLHQEQDQQGHSFVACHVKECDILTEYKR
WRPGNSLRWKGGQRIKLEGSDHAPVYTSLLQIPSIPPHSTPTSSARYIPMIYGIQQTLVS
VLMRRQVAEQIKSSQVSSLSQDGDVTLRSCSEREKRPLDTCPLLDVPPSNICTPGFESEF
LISRGDECSRISVDGDGCKTSSALRSDNIRRIPSNATKKKAKKSQGSQLSLKSFFQKSST
HCNFVDRDSDCSADRADLLETKPQTNEPPVTNDLSCSTQLCELKSSASSQEQDEPSTCSQ
EKNSVALLEWQRIQQVMQNSIPLCKGHREPCVARVVKKQGPNFGRRFYVCARAEGPASNP
EANCNYFKWAASKSTDVIIDLIVESSYNSLTPMLSTILALPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtaacatacaacgtgaatgggctgaggccgcggatttcacagtacggttct
ctcctcaaacttctcgattccttcgatgccgacatcatatgttttcaggaaaccaaactg
aggaggcaggaattgactgcggatttggtaatggcggagggttacgaatccttcttttcc
tgcactcgcacatgtgaaaaaggtcgatcgggctattcaggtgttgctacgttttgtcgg
gtgaagtcggcgttctcgagtacggaagtggcgttgcctgtagcggcagagcaaggcttt
acgggtcttatcgggaattctgaaccgggaagagaaaaaacgcctgaaattgcgccggga
ctggaggagtttgcaagagacgagcttcttaaggttgatagcgagggacgctgtgttatc
actgatcatggtcatttcgttttgtttaatctgtatgggcctcgagctgaaagcgatgat
ttggaaaggatcgaatttaagctcaaattcttcaagatattgcagaaaagatgggagact
ctgctctctcagggaaggagaatatttgttgttggtgatcttaatattgcgcccacttct
cttgatcgttgtgaagctgcaccagattttgagaacaatgaattcagaagatggttcaga
tcaatgttattggagtctggaggccctttctatgatgttttccgtgctaaacatcctgac
agagtaggagcatacacttgctggccgcaaaatacaggtgctgaagagtttaattatggg
acaagaattgatcacattctgtgtgctggctcatgcttacaccaagagcaggatcagcag
ggccacagctttgtagcttgccatgttaaggagtgtgatatattgacagaatacaaacgg
tggagacctggaaattcactcagatggaaaggaggacagcgcatcaagctggaaggttcg
gatcatgctcctgtttatactagtttactacaaattcctagtatccccccgcatagcact
ccaacttcctccgccagatatatccctatgatatatggtatccagcaaactcttgtatca
gtgttgatgagaaggcaagttgctgaacaaatcaagtcctcccaagtgtcgagcttatct
caagatggggatgttacactgagaagttgcagtgagagagaaaaaagaccacttgacaca
tgccccctacttgatgtaccccctagcaatatttgtactccgggctttgaatctgaattt
ctcatttctagaggagatgagtgttccagaatttctgttgatggggatggctgtaaaacc
tcaagtgcattacgaagtgacaatattagaagaatacctagcaatgcaacgaagaaaaag
gcaaagaaaagccagggatcccaactctccctgaagtcatttttccagaaaagctcaact
cattgtaattttgttgaccgtgatagcgattgttcagctgatagggcagatttactagag
actaaacctcagacaaatgaacctcctgtaacaaacgatctaagttgtagtacccagctg
tgtgaattgaaatctagtgcgtcgagtcaagagcaggatgagccaagtacctgttcgcag
gagaagaacagtgttgctttactggagtggcaaaggatacagcaagttatgcagaatagt
ataccactttgcaagggccatagagaaccttgtgttgctcgagttgtgaagaaacagggt
cctaattttggtcgcagattttatgtctgtgcacgtgctgagggacctgcatctaatccc
gaagcaaattgtaattattttaaatgggctgcatcaaaatctactgatgttataattgat
ttaattgttgaatcatcttataatagtttgacgccaatgctttcaacaatactagcgtta
ccaatttaa
DBGET
integrated database retrieval system
