KEGG   Ziziphus jujuba (Chinese jujube): 107424474
Entry
107424474         CDS       T04794                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:zju00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107424474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107424474
Membrane trafficking [BR:zju04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    107424474
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 107424474
NCBI-ProteinID: XP_015889779
UniProt: A0A6P3YW82 A0A6P4A6K8
LinkDB
Position
7:join(9242862..9242954,9243108..9243204,9243349..9243472,9243903..9244088,9244253..9244340,9244533..9244589,9244698..9244787,9244894..9245016,9245339..9245473,9246115..9246231,9246421..9246660,9246740..9246805,9246999..9247088,9247535..9247624,9247765..9247854,9248142..9248210,9248317..9248397,9248547..9248654,9248784..9248887,9249186..9249299,9249413..9249623)
AA seq 790 aa
MIANGAEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKEETRRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQYQGPAREKEKREKERSELRDLVGKNLHVLGQIEGVDLDMYKDSVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLME
RLANYAASSSEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPIMGVVTLYSSLLKFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLSAPLEKYNDIVTALKLSNYPRVME
FLDNATNKVMATVIIQSIMKNRTQISTIDKVEALFELIKGLIKDLDGTFDDEIDEDDFKE
EQNSVARLIQMLYNDDLEEMFKIISTVRKHILTGGSKRLIFTVPPLVFSSLKLVRQLQGQ
EENPFGDEESTTPKKIFQLLNQTIEALSNVPAPELALRLYLQCAEAANDCELEPVAYEFF
TQAYILYEEEISDSKAQVTAIHLIIGTLQRMQVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVCDQENLKDGERVLICLKRALRIANAAQQMSSATRGSTGSVTLFVEILN
KYLYFFEKGNAQITSSSIQSLIELITTEMQSDSTTPDPATNAFFASTLRYIQFQKQKGGA
VGEKYEPIKA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgatcgccaacggtgccgaggacgaagagaaatggctcgccgccgggattgctggtctc
caacagaacgccttctacatgcatcgagctctggattccaacaatctccgagacgccctc
aaatattctgctcagatgctctccgagcttcgaacttcgaagctttctcctcacaaatac
tatgaactctacatgcgggcatttgacgaattgaggaagttggagatgttcttcaaggaa
gagactcgtcgtggttgctctgttattgatctctatgaacttgtgcagcacgctggtaac
atattaccaagattatatctcctctgtacggtgggatctgtttacatcaaatctaaggag
gctcctgcaaaagatgttcttaaagatcttgtggaaatgtgccgtggcattcagcatcct
gtacgtgggctcttcttaagaagctacctctcccaagtcagcagggataaattacctgac
ataggttctgagtatgaaggggatgctgacactgttgtggatgctgtggagtttgttctt
cagaatttcacagaaatgaacaaactttgggttcgcatgcaatatcagggacctgcccgg
gaaaaggagaaacgggagaaagagaggagcgagctgcgtgatcttgttgggaagaacctc
catgtccttggtcagatagagggtgttgatctggatatgtacaaagattcagtgcttccc
agggtcctggagcaggttgttaactgtaaagatgagcttgctcaattctatttgatggat
tgcataattcaagtctttcctgatgagtatcacttgcaaacacttgacgtgttgttgggt
gcatgcccccaacttcagccatctgttgacatcaagacagtgctatcccagttaatggaa
aggcttgcaaattatgctgcttcaagttcagaagttttacctgagttcttgcaagtggaa
gctttttccaaattgagtaatgccattgggaaggtgatagaagcacaaccagacatgcct
ataatgggagttgtaactttatattcttctcttcttaaatttactctccatgtccacccg
gaccgacttgattatgccgaccaagtattgggagcatgtgtcaagaaactctctggcaaa
gggaagattgaagataacaaggcaacaaagcagattgttgcactcttaagtgctcccctt
gagaaatataatgatattgttactgcattaaagctttcaaattatccccgtgttatggaa
ttccttgataatgcaacgaataaagtcatggcaactgtgataattcaaagcattatgaaa
aatagaactcaaatttcaactattgacaaggtcgaagccttatttgaattgataaaaggg
cttatcaaggatttggatggaacttttgatgatgagatcgatgaagatgatttcaaggag
gagcagaattctgttgcacgacttatccagatgctttataatgatgatctagaagaaatg
tttaagattatatctacagtgaggaagcacatattgactggaggatcaaagcgtctaatt
tttactgttcctccacttgttttctcttctcttaagttggttaggcaattgcaaggccag
gaagaaaatccgtttggagatgaggaatcaactacaccaaagaaaatatttcagctttta
aatcagaccattgaggctctatcaaatgttccagcaccagaattggccttgcgtttgtat
ctgcaatgtgctgaggctgcaaatgactgcgaattagaacctgttgcatatgaatttttc
acccaagcgtatattctgtatgaagaagaaatttcagattcaaaggcacaggtgactgca
atacatttgataattgggactctccagaggatgcaagtctttggtgttgagaatagggat
acgttaactcacaaggccacggggtattctgcgaagcttttaaagaagcctgaccagtgc
agagctgtttatgcttgctcacatctgttctgggtttgtgatcaagaaaatttgaaggat
ggagagagggtcctcatttgcctaaagcgtgctttaagaattgcaaatgctgctcagcaa
atgtccagtgcaacaagaggtagcactggttcagtgacactcttcgtcgagatattgaac
aagtacctttatttcttcgaaaaagggaacgcacagattacaagttcttcaatccaaagc
ttgatcgaattgattacaactgaaatgcaaagcgactctactacaccagacccagctaca
aatgctttctttgccagcacattgcggtacatccaatttcagaagcagaaaggtggtgcg
gtgggtgagaaatatgagcctatcaaagcctaa

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