Ziziphus jujuba (Chinese jujube): 107424511
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Entry
107424511 CDS
T04794
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107424511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107424511
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107424511
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
107424511
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Na_H_antiport_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107424511
NCBI-ProteinID:
XP_048335455
UniProt:
A0ABM3IU60
LinkDB
All DBs
Position
7:join(12032522..12032815,12033275..12033874,12034368..12035159,12035236..12035447,12035574..12035909,12036382..12036533,12036625..12036788,12036908..12037054,12037660..12038076)
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AA seq
1037 aa
AA seq
DB search
MEGAAAAPSAVGKDQGWQGGDSIQASGPAGYPPPSDPSSTNVGGDTVDEDEDVCRICRNP
SELGNPLQYPCACRGTIKYVHQECLLQWLNRRKISRCEVCKHAFSFAPIYAENAPARLSP
QEFVLGIAVKVFRLLGLLQRFVYLCFVWLLVVPFVTHWIWELSFIKSFGEAQSVFLSHLN
ASVIFADCVHGFVLSLGIAYIFLGVTFMKFILLQEPGAAQLLVNRFFVPNRDMADAGRRW
GITRVLHGIKRNIIFLLGWWEVLLARFSAHVGIAEVAPFDELVNMRAPFFVYDETAFMVI
ASNVVFIVVIVLLPFSLGRSVITLQSWLFSSATTQILSSMMPMTESTLLLVNVLKNASVA
ISYFSSDSYAVGMPSSGVTEILNTEISKMEKAPDSISTSISASLYGEQKDGTYHLTDDAT
LFIGYMVTLLFLMFYLGTVTMMRYARGESFTMQRFFGTAFILDATLPLVRNFFSLLWLVV
TMVYSHFLTMVKVTFILGIKVGMFPLMCGWWLDVCTLRMFGQTIAERVKLIVENPVGMSL
AYWMAGNCYLLYVFIYVSRIQEVLRDGVLFFLPDIADPNYNFLNRIIERPTYKHICFFLL
SVGVHGSLIVMLVFLPTKLVIQFAPSVFPLTLFYSDTTTIAAVILRRCLFHFGFPCTVRF
YYPSATFKALLRKWLIVVGSILGLKNFLLPRHEGNGGNVEPARRQRVHSVVGPVVAILEG
SIVGTCTSDNADVIEEDREEEADSEFALRILMLLVLGWMTALIFNSLIMAVPLLLGRTLF
QAVSHLLTSHGITYDDVYSFIIGTCIMRAVMIGAKHAVEHVQTRGVVVLLSQIWRWFVTA
FKSCALVLLWVVLIPILSGLLVDLMVILPIRVPFDESSVFTLFQDWVLGIIFIVTLIGLR
MVDSMHFSMDGSWLVKFERVLNHGLPQQPTLWLFLEILVPMMIRLLFALCVPYMFARLVL
TMLGYPILVDSAIHRFVLPGCFALSIVWFCAKIIRAWVIHLHNSIRDDRYRVGERLQNYG
EDVSNKPNEVGNEVELQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgcggcggcagcgccgtctgctgtcggaaaggaccagggatggcaaggcggc
gactcaattcaagcttcaggtcccgcaggttatcctccgccttcggatccttcgtcgacc
aatgtcggcggcgatacagtcgacgaagatgaggacgtatgtaggatatgccgtaacccg
agtgagctgggtaacccgctccaatacccctgtgcttgccgtggcaccatcaagtacgtc
caccaggaatgccttcttcagtggctcaaccgccggaaaatttcccgttgcgaggtttgc
aagcatgcattttcatttgcccctatatacgctgagaatgctccggctaggctttcgcct
caggagtttgttcttgggattgctgtaaaagtattccgtctgttaggacttttgcagcgt
tttgtttatttatgcttcgtttggcttctcgtcgttccttttgttacacattggatttgg
gagttgtctttcataaagagttttggtgaagcccagagtgtatttctgagtcatcttaat
gcctcagttatcttcgcggattgcgtgcatggttttgttctctcacttgggatagcatat
atatttcttggcgtcactttcatgaagtttattcttttgcaagagccaggagcagctcaa
cttttggttaataggttttttgttccaaatcgagatatggcagatgccggtagaagatgg
ggaatcactagagttctccacggtatcaaaagaaacataatattccttttaggctggtgg
gaggtgctgctagcccgttttagtgctcatgttggcattgcagaagtggcaccctttgat
gaacttgttaacatgcgggctcccttttttgtttatgatgaaactgcgtttatggttatt
gccagcaatgtggttttcattgttgtcatagttcttttacccttttccttaggacgaagt
gttattacccttcaatcatggctcttctcttctgctacaacacaaatattgtcatcaatg
atgccaatgacagagtcaactcttctgttagtgaatgttttaaagaatgcatcggttgcc
atctcatatttttcatcagacagttatgcagttggcatgccaagctcaggagttacagag
attctaaatacagagatatcgaaaatggaaaaggctccagatagtattagtacatcaatt
tcagccagcttgtatggtgaacaaaaggatggaacatatcacctgactgatgatgctact
cttttcattggatacatggtcactctattatttcttatgttttaccttgggactgtaact
atgatgcgttatgctaggggtgagtcttttaccatgcagaggttttttggtactgcattt
atattagacgcaaccctgcccctggtcagaaattttttttcactactttggctggttgtt
accatggtgtatagccattttctgacaatggtgaaagttacttttatcttggggattaaa
gtcggcatgtttcctttgatgtgtggctggtggttagatgtttgtaccttgagaatgttt
gggcagacaattgctgagagggttaagttaattgtagaaaatcctgttgggatgtccttg
gcttactggatggctggaaattgctatctgttatatgtttttatttatgtgagccgtatt
caagaggtgttacgtgatggagtattgttctttcttccagacattgccgatccaaactac
aactttctcaataggattattgaacggcctacttacaagcatatatgcttctttctattg
agtgttggtgttcatgggagtctgattgtgatgctggtgtttttgccaaccaaactagtt
attcaatttgcaccctctgttttcccccttactcttttttactcagatacaacaactatt
gctgctgtgattctgaggaggtgcctttttcattttggctttccgtgtactgtccgtttt
tactatccatctgcgacatttaaagcccttctgcgcaaatggcttattgttgttggctca
atacttgggctaaaaaatttcttactacctagacatgagggaaatggtggaaatgttgaa
ccagcaaggcggcaaagagtacatagtgtagttggaccagttgttgcaatccttgaaggt
tcaattgtaggcacttgtacatctgataatgctgatgttatcgaagaggacagggaagaa
gaggctgattctgaatttgcattacgcattctaatgctgctggtgctgggatggatgact
gcactcatctttaattcattgataatggctgtacctcttttacttggacggacactcttt
caagctgtttctcacctccttacatctcatggaattacgtatgatgatgtatattctttc
attatcggaacctgcattatgcgagctgtaatgattggtgccaaacatgctgtagagcat
gttcaaaccagaggagtggtggttcttttgagccaaatctggaggtggtttgtaactgct
tttaagagttgtgctcttgtgctcttgtgggtcgttctcatcccaattttgagtggtctt
ctggtagacctcatggtaattctgccaatacgagtaccttttgatgaaagctcagttttc
accttgtttcaagattgggtacttggtatcatcttcattgtcactttaatcggactgaga
atggttgatagcatgcatttctctatggatgggagttggctggtgaagtttgagcgggtg
cttaatcatggtctcccccaacaacccaccttatggctgttcctagagattttggtgcca
atgatgataaggctgctatttgcactttgtgttccttacatgtttgccagactggtatta
accatgcttggatatcccattctagtcgactcagccatccaccggtttgtgttgcctggc
tgcttcgctttaagcatcgtgtggttttgtgcaaagatcatccgtgcatgggtaattcac
ctgcacaactcaatcagagatgatcgctaccgtgtaggtgagaggttgcaaaactatggg
gaagatgttagtaataagccaaatgaggtggggaatgaagtagaattgcaatag
DBGET
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