Ziziphus jujuba (Chinese jujube): 107424512
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Entry
107424512 CDS
T04794
Name
(RefSeq) transcription factor SPATULA isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107424512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107424512
Transcription factors [BR:
zju03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107424512
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
CENPU
Motif
Other DBs
NCBI-GeneID:
107424512
NCBI-ProteinID:
XP_015889818
UniProt:
A0A6P4ALW8
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All DBs
Position
7:complement(join(11880430..11880459,11880554..11880693,11880864..11880933,11881025..11881339,11882541..11882606,11882696..11882761,11882873..11882974,11883386..11883799))
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AA seq
400 aa
AA seq
DB search
MGDVYEYDKNACSSSASVAQTVAAPDEISLFLQQILVRSASSSSSSSDSSTLVAAQAGMR
AQFSLSSPSSIMGFCTSHGLPDNMHRQCRPQFLGEGISAIDSSGAYFLGNASANAPNVSS
SSLGASENENDDYDCESEEGLEALVEEVPTKPVARSSSKRSRAAEVHNLSEKRRRSRINE
KMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPMCVPGALPPIQL
SQTRMDFGEGNRSLHLNMSGTLPMDQETSTQNLFGLSNQCSAPNQTFVPNMSSIIGSESS
FGIEPSIQAHLGPFQLHTSAEEICKDVAMQHQQTIVNHLETNPLDSNTGGTATVAFNAQT
SNIKGSNYLETCITERDRLEGGLLKAMEQNLLADRKVCPK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtgtatgagtatgacaaaaatgcctgttcatcttcagcttcagtggctcaa
actgttgcggccccagacgaaatctcgctatttctgcagcagattctggtccgatcagca
tcctcgtcatcatcgtcttcagattcttctaccttggttgcggcccaagcgggcatgcga
gcgcagttttcgttgtcttcgccttcgtccattatgggattctgtacctcccatggcttg
ccggacaatatgcatcgtcaatgtcggcctcagttcctaggggaagggatctcggccatt
gactcttccggtgcttactttttgggcaatgcgagtgcgaatgctccgaatgtgtcatct
tcttcattgggagcgagtgagaatgagaacgatgattatgattgcgaaagcgaggagggt
ctggaagcgttggtggaagaggtacccacaaagcctgttgctcgcagttcctcaaagaga
agcagagctgcagaggttcataacttgtctgaaaagaggaggaggagtaggatcaatgag
aaaatgaaggcattgcagaatctgattccaaattctaacaagacggacaaggcttcgatg
cttgacgaggcaattgagtatcttaagcagcttcagctccaagtacagatgttatctatg
agaaatggattaagcttgcatcctatgtgtgtacctggagcattgccgcctattcaactc
tcccagacgagaatggactttggagagggaaatagatctctgcatctgaatatgtcaggc
acccttcctatggatcaagaaacctcaacacaaaatctgtttggtttgtccaatcaatgc
tctgccccaaaccagacatttgtacctaatatgtcaagtataatcggctctgaaagttcc
tttggaatcgaaccatcaattcaggctcacttaggaccatttcaactgcacacatcagct
gaggaaatttgcaaggatgtcgcaatgcagcatcaacagacaattgtaaatcatctagag
acaaatcctttagactctaatacaggaggcacggctactgtggccttcaatgcacaaaca
tccaatataaagggaagtaactatctagaaacatgcatcacagaaagagaccggttagaa
ggggggcttctaaaggccatggagcaaaaccttcttgcagacaggaaggtgtgtcccaaa
tga
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