KEGG   Ziziphus jujuba (Chinese jujube): 107424534
Entry
107424534         CDS       T04794                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X2
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03030  DNA replication
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107424534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zju03032]
    107424534
Enzymes [BR:zju01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107424534
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    107424534
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_2 DUF1744 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 107424534
NCBI-ProteinID: XP_015889844
UniProt: A0A6P4A3U3
LinkDB
Position
7:join(11858533..11859723,11859912..11860082,11860186..11860269,11860424..11860498,11860726..11860790,11861698..11861788,11861937..11862125,11862637..11862800,11862921..11863035,11863527..11863706,11863799..11863912,11864374..11864493,11864593..11864910,11865003..11865095,11865427..11865545,11865658..11865730,11865848..11865904,11865982..11866074,11866480..11866602,11866689..11866786,11866886..11866931,11867456..11867569,11867680..11867763,11867899..11868012,11868106..11868195,11868285..11868361,11868782..11869001,11869137..11869190,11869296..11869415,11869520..11869594,11869720..11869866)
AA seq 1557 aa
MADDQPSVASRRRSRGAEATARAEALERLKALRSGGRRSEAGGFSIKMEDPIYDTVADDE
YEALVAKRREEVRGFIVDDDGLGYGDIGEEEDWSRAGLSLSSDESDGETGRPKRKKVEKK
DPKPKKPSATSASLSAAAAMMGKQRLSSMFTSSIFKKTRDEKAKGLSCDSIVDDVIAEFA
PNDADRERRRRAQTGHLPGARSLMPTVKSEKDSHGVINLQGGSESVSILGKDDPELTTNV
ANGKSELGFDQNQEEVDERGLIVGSESRKDLFDEVAQAPSSESTDSLDKGGVIEKKTKNV
VEMKAEPAVKKGEVFTLNAKIKEEKDPALSAIAGWQAVRSEGTVDVGGGAAEVNAGSNGE
ENSGFDLDSDGSLPFYILDAYEEFYGANMGTVYLFGKVKAGTAYHSCCVVVKNIQRCVYA
VPNSSSFHSDEMVELEKDAEESRISPTEFRKKLQDMASGLKSDVAKHLLDVNVSTFSMTP
VKRNYAFERSDIPVGENYVLKINYPFKDPPLPANLKGETFCTLLGTHSSALELFLVKRKI
KGPSWLSVSKFSSCPAPQRVSWCKFEVIVESPKDIGVSTSSKNTIEIPPVVVTAINLKTV
INEKQNVNEIVSASVICCHKAKIDTPMLASEWKRPGMLSHFTVVRKLDGGIFPMGFSKEA
TEKNSKAGSTVLSFESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCKMP
SSMWSKIGRLKRSVMPKLSKGSTIFGSGASPGILSCIAGRLLCDTYLCSRDLLKEVSYSL
TQLTKTQLNKDRKEISPQDIPRMFQTSESLMELIEYGETDAWLSMELMFHLSVLPLTRQL
TNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIIPDKMTSYTKETKLIKRRINSDVENK
NVDELDDANFDNDASNDNHGKGKKGPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQE
YNICFTTVERSPEGLVPRLPSSKTPGVLPELLKNLVQRRRMVKSWMKNASGIKVQQFDIQ
QQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNSLNLEVIYGDTD
SIMIYSGLDDIAKAKSIAGKVIQEVNKKYKCLEIDLDGVYKRMLLLKKKKYAAVKVLFKD
GKPYEVIERKGLDMVRRDWSLLSKELGDFCLSQILSGGSCEDVVESIHNSLMKVQEDMRK
GHVELEKYIITKTLTKPPEAYPDARNQPHVLVAQRLKQSGYVSGCSVGDTIPYIICCEPG
ASSGSSSGIAQRARHPDELKREDGKWIIDIEYYLSQQIHPVVSRLCASIQGTSPERLADC
LGLDSSRFKSNSSEAASNDPSSSLLFAVDDEERYNGCEPLVLSCPSCSSTFDCPVIFSSI
CKSINEKPTSSQADESSCNFWHGLRCPKCPEGGDVGKLSPAMIANQVKRQADGFVSMYYR
GLMMCDDETCKYATRSINLRLVGDSERGAVCPNYPRCNGRLIRKYTEAELYKQLTYFCHV
LDTVRCIEKMEPNTRLPVEKEMAKIRPIVNLAASTIQRIRDRCAFGWIKLQDLIVAV
NT seq 4674 nt   +upstreamnt  +downstreamnt
atggcggacgatcagccctcagtagccagcaggaggcggagcagaggggccgaggcgacg
gcacgtgccgaagccctggaacgcctcaaggctttgcgcagcggtggccggcgatccgaa
gccggtgggtttagcatcaagatggaagacccaatttacgatacagtcgccgacgatgag
tacgaggcacttgttgccaagcgccgtgaggaagtccgaggcttcatcgtcgatgatgat
ggtctaggatacggcgacataggtgaggaagaggactggtctagagctgggctttctctg
tcttcggatgaatctgacggtgagacgggaaggcccaagaggaagaaggtagagaagaaa
gatcctaagcccaaaaagccatccgccacttccgcttccctttccgccgccgcggcgatg
atgggtaagcagaggctctcatcgatgttcacttcgtcgattttcaagaaaactagggat
gagaaggctaaagggttatcttgcgatagcatcgtcgacgatgttattgctgagtttgct
cctaacgacgcagatagagagaggcgcagaagagcccaaacgggtcatttgcctggtgct
aggagtttgatgcccactgttaagagtgagaaagactctcacggtgttattaatctacag
ggtggttctgaatctgtttcaattcttggaaaagatgatcctgaattgaccacgaatgtt
gcaaatggtaaatctgaattgggatttgatcaaaatcaggaagaagtcgatgaaagaggg
ttgattgtggggtcagaaagtaggaaggacttgtttgatgaagtggctcaagccccatcg
tctgaatccactgattctttagacaagggaggtgtcattgagaagaaaactaaaaatgtt
gttgaaatgaaagcagaaccggcagtgaagaaaggggaggtatttactttgaatgcgaag
atcaaagaggaaaaggatcctgcattgagtgctattgcaggatggcaggcggtccggagt
gaagggactgtggatgttggtggtggtgctgctgaggtcaatgctggttcaaatggtgaa
gaaaattcaggtttcgatttggattcagatggctcgctgcctttttacattcttgatgcc
tatgaagagttttatggtgctaatatgggcactgtctatctatttgggaaggtcaaagca
ggaactgcatatcacagttgctgtgtggtggtcaagaacattcaaagatgtgtctatgca
gttccaaatagttcttcatttcactctgatgaaatggtggagcttgaaaaggatgctgaa
gagtctcggatatctcccacagaatttcgtaaaaagctgcaggacatggcatcaggatta
aagagcgacgtggcaaaacatttgttagatgtcaacgtatcaacttttagcatgacccca
gtcaagaggaattatgcatttgaacgatcagacatacctgtaggagagaattatgtcctc
aagatcaactatcctttcaaggacccgccgcttccagcaaatctaaagggagaaactttc
tgtaccctgctaggaacacatagcagtgctttggagctttttcttgttaaaaggaagata
aaaggaccgtcttggttatcagtatcaaaattttctagctgcccagctccacaacgggtc
agctggtgcaaatttgaggtgattgttgaatctccaaaagacattggtgtttcaacttcc
tcaaagaacactatagagattcctccagtggttgttacagccataaatttgaaaactgtt
atcaatgagaagcagaatgttaatgaaatcgtctctgcatctgttatctgctgtcacaag
gccaagattgacactccgatgttggcctcagaatggaagaggcctggtatgctaagtcat
tttactgttgttcgcaagcttgacggaggcatatttccaatgggattttctaaagaggct
acagagaagaactcaaaggctggatcaactgtattaagctttgaaagcagtgaaagggct
ttgttaaaccgtttgatgattgagttatacaagttggatagcgatgttcttgttgggcat
aatatatctgggtttgacctggatgttctccttcatagggcacaggtttgtaaaatgcca
agtagtatgtggtcaaaaataggtcgccttaagcgatctgtgatgcctaagctttcgaaa
ggaagcaccatttttgggtccggagcaagtcctgggatcttgtcatgcattgctggtagg
ctgttgtgtgatacatacttgtgttctcgtgacctattaaaagaggttagctattccttg
acgcaacttacaaagacccagctgaacaaagacaggaaggagatcagtccacaagatatt
cctagaatgttccaaacatcggagtccctcatggagctcattgaatatggtgagacagac
gcatggttgtctatggagctcatgtttcatctgagtgttcttcccctcacacgtcaactg
actaatataagtggtaatctttggggaaaaactctccagggtgctagggcacaaagagta
gagtatcttctattgcatgcattccacgcaaagaagtacatcatcccagacaaaatgaca
tcttatacaaaggaaacaaagttgatcaaacgtagaataaatagtgatgtagagaacaaa
aacgttgatgagttggatgatgcaaattttgataacgatgcttcaaatgataatcatgga
aaaggcaagaaaggtcctgcctatgcaggcggattagtcttggagccaaaaagaggttta
tatgacaagtatatattacttctggacttcaatagcctttatccttctattatccaggaa
tacaatatatgcttcacaacagtagaaagatccccagaaggattagttccccgtttacca
tctagtaaaacacctggagttctacctgagttactaaaaaatctggttcaaaggaggaga
atggtcaagtcatggatgaagaatgcatctggtatcaaggtccaacaatttgacattcaa
cagcaagcactgaagctgacagccaacagtatgtacggatgcttggggttttcaaattca
agattttatgcaaagccactggcagagcttataacactacagggaagagagattttacag
agtactgttgaccttgtccagaatagtttgaacttggaggttatctatggtgatacagat
tccattatgatttatagtggacttgatgacattgcaaaagcaaaatccattgcaggaaaa
gtcatccaagaggttaacaagaagtacaagtgtttagagattgacctagatggtgtgtat
aagagaatgctacttctcaagaagaagaagtatgcagctgtgaaggtgttattcaaggat
ggaaaaccatatgaggttattgaacgtaagggccttgatatggttcgtagagactggagc
ttactttcgaaggaattaggagatttctgcctcagtcaaattttgtcaggagggtcctgt
gaggatgttgttgaatcaattcataactctctgatgaaggtacaagaggatatgaggaaa
ggacacgtagaacttgaaaaatatatcatcacaaagacattaactaaaccacctgaagcc
tacccagacgccagaaaccaaccacatgttctagtggcccagagattaaagcaaagtggt
tatgttagtggttgctccgttggtgataccattccttatatcatttgttgtgaaccgggg
gctagttcaggtagttcaagtggaattgctcaacgtgctagacatccagatgaactaaaa
agagaagatgggaagtggattattgacattgaatactacttgtcacagcagatccatcct
gtggtatcacgcctttgtgcttcaattcaaggcactagcccagaacgcttggctgattgt
ttagggctcgactcttctaggttcaaaagtaattcaagtgaagctgccagcaatgatcct
tccagttcactcttgtttgctgttgacgatgaggagaggtataatggctgtgagcctttg
gtcttgtcatgtccgagctgctctagtacttttgattgtcctgtcatattcagttccatt
tgcaagtccatcaatgaaaagccaacaagttcacaagcagacgaatctagttgcaacttt
tggcatggattgaggtgtcctaaatgcccagagggcggtgatgttggcaaactatctcca
gcaatgatagccaaccaggtgaaaagacaagctgatgggtttgtttcaatgtactacagg
ggcttaatgatgtgtgacgatgaaacttgcaaatatgccacgcgtagtatcaacctccgg
cttgttggtgattctgagaggggagcagtttgtcctaattatcctcgctgtaatgggcgt
ctcataagaaagtacacggaggcagaactatacaagcagctcacatatttctgccatgtg
ttggatacagtgcgctgcatagaaaagatggagcctaacactagattgccagtagagaaa
gagatggccaaaatccggccaattgttaatttggcggcatcaacaattcaaaggattcga
gaccgatgtgcctttggatggataaagctgcaggatcttattgttgcagtttga

DBGET integrated database retrieval system