Ziziphus jujuba (Chinese jujube): 107424838
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Entry
107424838 CDS
T04794
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107424838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zju03021
]
107424838
Transcription machinery [BR:
zju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107424838
Prokaryotic type
Archaeal type
TFB
107424838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
107424838
NCBI-ProteinID:
XP_015890200
UniProt:
A0A6P4AVT6
LinkDB
All DBs
Position
7:complement(join(10454845..10455678,10456130..10456288,10457655..10458257))
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AA seq
531 aa
AA seq
DB search
MRCPYCSAGQGRCATTSGGRSITECDSCGRVVEERQSQPHHLFHLRAQDNPLCLVTSDLP
TLHQHYQTHDDDDEDPFEPTGFITAFSTWSLEPSPLFLRSCLSFSGHLAELERTLESSSS
SSSSSSTSSSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVE
ALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHM
PRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEIC
KVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRTSATKADLAEAT
ASLDREKQPEAKPNNKPNEVTDMIHQARVKEDVESKGNARGAHNPLLNRSTIIWQTQHPF
GTSGLRTVGDKSQNIVQGMEIDEAQSNHQQLEQKIEKETKDITNSPKQTQLSSPLASSSS
LATRQFRPPSPLGPSPSVQFLQPPKLAPGYTELKGSGGQNGNKNAKHFGDI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccgtactgctcggccgggcaagggcggtgcgccaccacgagcggcgggagg
tccataacggagtgcgattcgtgtgggcgcgtagtggaagagcgacagtcccaacctcac
cacctgttccatctacgcgcccaagacaaccctctctgcctcgtcacctccgacctccca
accctccaccaacactaccagacccatgacgatgacgacgaagaccccttcgagcccacc
ggcttcatcactgccttctccacctggtccctcgagcccagcccactttttctccgctcc
tgcctttccttctccggccacctcgccgagcttgagcgcacccttgaatcgtcctcctct
tcttcttcttcatcatcgacttcatcatcgtcgacggttgtggttgataatctgagggcg
tacatgcaaatcatcgatgtggcctcgattcttggcttggactacgacatctcagaccac
gcgtttcagctatttagggattgttgctccgctacttgcttgaggaatcgtagtgttgaa
gcccttgccactgctgctcttgtccaggccattagagaggctcaagaacccagaaccctc
caagaaatttcaatcgcagccaatgttccacagaaggaaatcggaaaatacatcaaaata
ctaggagaagctctacagcttagtcagcccattaacagcaactccatatcagtccatatg
cctaggttttgcactctccttcagctcaataaatctgctcaggaactggcaactcatatt
ggtgaggttgtcatcaacaaatgtttctgcactcgacgcaatcccattagcatctctgca
gctgctatatatttggcctgccaactggaagacaaacgcaaaacacaggcagaaatttgt
aaggtgactggtcttactgaagtcactctccggaaagtgtacaaggagcttttagagaat
tgggacgatttgctaccatctaattatactccagctgttcctcctgaaagggcatttcca
actactgtaattgcttcgggccgcacttcagcgaccaaagctgatttagctgaagccact
gcttctttagacagagagaagcaacctgaagctaaacctaataacaaaccaaatgaagtc
acagatatgatccatcaggcaagagtcaaagaggatgttgaaagtaaaggaaatgcccga
ggggcacataaccctttattgaaccggtctacaattatctggcaaacccagcatccgttt
gggacttctggtttgcggacagtgggtgataagtctcagaatattgtccaaggaatggaa
attgatgaggcacagtcaaaccatcaacagttagagcagaagatagaaaaggagacaaag
gacatcacaaactcgccaaagcaaactcaattgtcaagtcctctggcttcaagttcaagt
ttagctaccaggcagtttcggcccccatctccattgggtccttctccaagtgttcagttt
ctgcaaccacctaagctagcaccaggttataccgagcttaaaggctctggaggtcaaaat
ggaaataaaaatgccaaacactttggggacatctag
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