KEGG   Ziziphus jujuba (Chinese jujube): 107425209
Entry
107425209         CDS       T04794                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107425209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107425209
   03041 Spliceosome [BR:zju03041]
    107425209
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107425209
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107425209
Spliceosome [BR:zju03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107425209
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 107425209
NCBI-ProteinID: XP_024931978
UniProt: A0A6P6GCW6
LinkDB
Position
1:join(42937916..42938076,42938208..42938248,42938826..42938989,42939136..42939238,42939326..42939495,42939588..42940055)
AA seq 368 aa
MDGFSEQGQYGDDTMHYNDQEFHKEFEQREQQHDSGLGFAMRDSIGGHRDSASGKLFVGG
VAWETTEESFADYFSKYGEIIDSVIMIDKHSGRPRGFGFVTFADPAVADKVLEEDHVLDS
RAVEVKRTVPREDMEVRGIIKTKKIFVGGLPASLTNDELREYFSLYGSIVDYQIMLDYKT
GRSRGFGFITFENEDAVEKIFLEGKIHELGGKQVEIKRAEPRKGGDYNGNAVKSHGGFDS
AAGRYGGYNSGNWYNGKMGRGYDGYSAYDVYGNYVGDYGGSYVGFYGGYPYGFGYGGTMY
GSAGFGGNGYGIPGGYIGVTAYGGNNGRGYGNGFVDHNSGAGNGGFDTGKGYDRSDVYMN
GRYHPYLK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggatggtttttcagaacagggtcaatatggagatgatacaatgcattacaatgaccaa
gaatttcacaaggaatttgaacagagagagcagcaacatgattcagggcttggtttcgca
atgagggattcaattggtggtcaccgtgattcagcttcaggaaaacttttcgttggaggg
gttgcttgggagactactgaagaaagctttgctgattacttcagcaagtatggagagata
attgattctgttataatgattgacaaacattctgggaggccaaggggttttggatttgtg
acatttgctgatcctgcagttgctgataaggttttggaagaagaccatgtcttagacagt
cgagcggtggaagtgaagaggactgtccccagggaggatatggaggttaggggcataata
aagacaaagaaaatctttgttggtggcttaccagcatctttgaccaatgatgaattgagg
gaatatttctctttatatggtagcattgttgattatcagatcatgctagactataaaact
gggcgttctagaggatttgggtttattacattcgaaaatgaagatgctgttgaaaaaata
tttttggagggaaaaattcatgaactaggaggcaaacaggtggaaataaaaagggctgag
cctagaaagggtggtgattacaatggcaatgctgttaagtctcatggtggttttgatagt
gctgcaggtagatatggtggttataattctggaaattggtataatggaaaaatgggaagg
ggctatgatgggtacagtgcctatgacgtttatggcaattatgtgggagactacggtggc
agctatgttggtttttatggtggatatccatatggatttggatatggaggaaccatgtat
ggcagtgctggtttcggaggcaatggttatggcattcctggtggttacattggagtgact
gcatatggtggcaataacggtagagggtatggaaatggttttgttgaccataatagtggt
gctggcaatggcggttttgatactggtaaaggatacgataggagcgatgtttatatgaat
ggaagatatcatccttaccttaagtga

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