KEGG   Ziziphus jujuba (Chinese jujube): 107425222
Entry
107425222         CDS       T04794                                 
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107425222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107425222
   03110 Chaperones and folding catalysts [BR:zju03110]
    107425222
   03029 Mitochondrial biogenesis [BR:zju03029]
    107425222
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107425222
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     107425222
Messenger RNA biogenesis [BR:zju03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     107425222
Chaperones and folding catalysts [BR:zju03110]
 Heat shock proteins
  HSP60 / Chaperonin
   107425222
Mitochondrial biogenesis [BR:zju03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    107425222
Exosome [BR:zju04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107425222
  Exosomal proteins of other body fluids (saliva and urine)
   107425222
  Exosomal proteins of breast cancer cells
   107425222
  Exosomal proteins of colorectal cancer cells
   107425222
  Exosomal proteins of bladder cancer cells
   107425222
SSDB
Motif
Pfam: Cpn60_TCP1 DUF5570
Other DBs
NCBI-GeneID: 107425222
NCBI-ProteinID: XP_015890662
UniProt: A0A6P4A8C5
LinkDB
Position
1:complement(join(43002610..43002712,43002824..43002902,43003142..43003247,43003341..43003444,43003529..43003628,43003706..43003801,43004236..43004313,43004378..43004446,43004516..43004596,43005192..43005281,43005367..43005453,43005829..43005933,43006015..43006110,43006394..43006569,43007130..43007289,43007725..43007856,43008267..43008326))
AA seq 573 aa
MYRIASRLASSINSSASKKLIYSRAICNRNYVAKDIKFGVGARAAMLQGVSEVAEAVKVT
MGPKGRHVIIEQPRKAPKVTKDGVTVAKSIKFSEKSKNVGADLVKQVAKATNTVAGDGTT
CATVLTHAILTEGCKSIAAGVNVMDLRSGINIAVDAVITDLKSRALMISTPDEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGSTLDNELEVVEGMKLGRGYISPYFITDQKT
QKCELENPLILIHEKKISDMNSLVRILELAVKANRALLVVAEDVESDPLAMLILNKHRAG
LKVCAIKAPGFGENRKANLDDLAILTGGEIVSEDRGLTLDKAQPEMLGTAKKVTVSLDDT
IILHGGGDKKLIEERCEELRTAMEKSTAVFDKEKAQERLSKLSSGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYASKALEKLHTDNEDQKRGIQIIQSALKAP
TFTIATNAGFDGALVIGKLLEQDDENLGHDAAKGEYVDMVKAGIVDPLKVVRTALVDAAS
VSLLLTTTEATVVDDQSEKTLPSRMPNMDDMDY
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtatagaatagcttcaaggttagcttcatccatcaattcctccgcttctaagaaattg
atatatagtagggctatatgcaataggaattatgtggccaaagatatcaagtttggggtt
ggagctcgtgcagctatgctgcaaggtgtttctgaggttgccgaagctgtaaaagtcaca
atgggacccaagggtcgccatgtgattattgagcaacctcgtaaggctcccaaggtcaca
aaggatggcgtaactgttgccaaaagtatcaaattcagcgaaaaatctaaaaatgtaggt
gcagatcttgtaaagcaggttgctaaagctacaaatactgttgcaggggatggtacaact
tgtgcaactgttcttacacacgcgatactcacagaaggttgcaagtcaatagctgctggt
gtaaatgtgatggatttacgcagtggtatcaatatagcagttgatgctgttattacagat
ctgaaaagcagagcactaatgataagcacaccagatgagattacccaggtagccacaatt
tctgctaatggggaacgtgagattggagaattgatcgcaagggcaatggagaaagtcggg
aaagaaggagtcattaccgttgctgatggaagcactttagataacgaactggaagtggtg
gaaggaatgaagctcggcagaggttatatttctccttactttattacagatcagaagacg
cagaaatgtgaactggaaaaccctctcattctcattcatgaaaagaaaatttcggacatg
aattcacttgtgagaatactagaactagcagtaaaggcaaatagagcacttcttgttgtg
gccgaggatgttgaaagtgatccgctagctatgcttatactcaacaagcatcgtgctggg
cttaaggtctgtgccatcaaagctcctggttttggggaaaacagaaaagcaaatttagat
gatcttgccattctcactgggggagagattgttagtgaagatcgtggtttaactcttgat
aaagcccaacctgaaatgcttggtactgcaaaaaaggtgaccgtttctcttgatgacaca
attattctacatggaggtggtgataaaaaattgattgaagaaagatgtgaggagctgaga
acagcaatggagaagagtactgccgtttttgacaaggaaaaagcacaggaacggttgtcc
aagctatccagtggtgtagctgttttcaaggttggtggagctagtgaggcagaggttggg
gaaaggaaagatagggtgactgatgctctaaatgccacaagagcagccgttgaagagggt
attgtgccaggtggtggtgttgctctcctttatgcttccaaagctttggagaaacttcac
actgataatgaagaccagaaaagaggcatacaaattatccaaagtgccctcaaggcgcct
acgttcacgatagcaacaaatgctggtttcgacggtgctttggttattggcaagttgttg
gaacaagatgatgagaatttgggtcatgatgctgctaaaggtgaatatgttgacatggtg
aaggccggaattgtagatccactgaaggttgtgagaacagccttggtagacgctgccagt
gtgtccttgctattaacaactacggaagcaactgtagtggacgatcaaagcgagaagaca
cttcccagtcgaatgccaaatatggatgatatggactactag

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