Ziziphus jujuba (Chinese jujube): 107425269
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Entry
107425269 CDS
T04794
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107425269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107425269
03036 Chromosome and associated proteins [BR:
zju03036
]
107425269
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107425269
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107425269
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
107425269
Noncanonical PRC1 (PRC1.1)
107425269
Noncanonical PRC1 (PRC1.3/1.5)
107425269
Noncanonical PRC1 (PRC1.6)
107425269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-UDP
zf-rbx1
DUF4695
zf-Nse
DUF3337
zf-RING_10
zf-C3HC4_5
RAWUL
ZNF512_C2HC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107425269
NCBI-ProteinID:
XP_015890726
UniProt:
A0A6P4AP81
LinkDB
All DBs
Position
1:join(23645224..23645317,23645471..23645513,23647005..23647063,23648935..23649016,23649220..23649340,23649434..23649475,23649964..23650491,23650762..23650869,23650972..23651178,23651349..23651393)
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AA seq
442 aa
AA seq
DB search
MPAQKRSHDALEDDPIQNNHENGHEQPEDDEESDRSPSSSNGDRDEYIMVKLAEIRKEVQ
CPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLI
AALYPDIDKYEEEELAFHEEEKARNKQIQASIAQTLRRQSEALGRKKTTAKATAAAFMRR
SQGNYRNSHLRGRRNYRNAADNQGSDDNEDENGNDGGKDSSSADERTETRSKRCKRWGGA
RYSQPSATVGSDGGGDENDSEANKESLGMTMGLVGSSERLAWGKGGMRSHTRYGGSSGGN
GKNARNSRLSKLMDYLRNSEENELDVHLMLVSIDEQRIPSLQRPYLCCRPTLSVRHLCQY
VAHQTKLQDNEVEIYLLKELHAKFSPSTSMSVPIPKPSVLECKEKLRALNEQETLAELKA
YSSTRGHLLLAYEKKWSSNWYC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacagaagcggtcgcacgatgctttggaagatgatcctatacaaaacaaccac
gaaaacggccatgaacagccggaagacgacgaggaatccgatcgaagcccttcgtcgagc
aatggagacagagacgaatatatcatggtgaagttggcagagatacgcaaggaagttcag
tgtcctatctgcttagggatcattcgaaaaacaagaacagtgatggaatgccttcaccgc
ttctgtagggaatgcatagacaaatctatgcgcctggggaataatgagtgccctgcttgc
cgcacacactgtgctagtcgtcgctctttgagagatgatccaaactatgattccttaatt
gcagctttgtatccagatattgacaagtatgaggaagaggaattagctttccatgaagag
gagaaggctcgcaataagcagatccaagcttccattgcccagactttacggcgacaatcg
gaagcccttggcaggaaaaaaacaactgccaaagccacagcagctgcatttatgaggaga
tcgcagggtaactatcgtaattctcatttgaggggaagaagaaactaccgaaatgctgct
gacaatcaagggtctgatgacaatgaggatgaaaatggtaatgatggaggcaaagattca
tcttctgcggatgagcgcacggaaactagatcaaaaagatgcaagagatggggaggagct
cgatattctcaaccttcagcaactgttggttcagatggcggaggtgatgaaaatgattct
gaagctaacaaggaaagcctgggcatgactatggggcttgttggcagctcggagaggctt
gcctggggcaaaggtggtatgcggagtcacacacggtatggcggttccagtggtggcaat
ggtaagaatgccaggaacagccgcctctcaaagttaatggattatcttcgaaactctgaa
gaaaatgagttggatgtacacctcatgcttgtttctatcgatgaacaaagaattccaagt
ttgcagcggccatatctttgctgcaggcctactttgtcagttaggcatctctgtcagtat
gttgctcaccaaaccaaattgcaagacaatgaagttgagatatacttgttaaaagagctc
catgccaaattcagtccttcaacctccatgagtgttccaattcctaagcctagtgtatta
gagtgtaaagaaaagttgcgagctttaaatgagcaagaaactttggcagaacttaaagca
tacagttctactcgtggacatctacttctggcctatgagaagaagtggagctcaaactgg
tactgttga
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