Ziziphus jujuba (Chinese jujube): 107425802
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Entry
107425802 CDS
T04794
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107425802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107425802
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107425802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107425802
NCBI-ProteinID:
XP_015891327
UniProt:
A0A6P4A9K5
LinkDB
All DBs
Position
9:complement(join(5284945..5286018,5287307..5287528))
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AA seq
431 aa
AA seq
DB search
MESDEGKLFIGGIAWDTTEDKLSDYFGQYGDVTQTVIMRDKTTGRPRGFGFVVFSDPSVL
DNVLNDKHTIDGRVVEAKRALSREEQTSSKTGNFNSSRNSGGGGNFKTKKIFVGGLPSTL
SEDGFRQFFESFGHVTDVVIMYDQNTQRPRGFGFITFDTEEAVDRVLYKNFHELNGKLVE
VKRALPKDANPGGGGRVGGYQGYSGASTNTFDGRMDGSRYMQPQTAAGGFPPYSGYGAPG
YGYGAASSGVSYGGYGSYNVGGYGSAGAGYGGPAGSYGNLSAPSPGYVGGAPGAMKNAWG
SQTPSAYGASGYGAAATWSAPAGGGASSAPRGQSPSGASGYGSQGYGYGSYAGSYGSYSG
AYGASGGRAGSVPNSNSSGVASGGDHQGSGSGYMGSGYGDTNGNTGYSNAGWRSDPSQPA
GGYGGTQSRQA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatgaaggaaagctattcataggaggaatagcgtgggacacgacagaagac
aagctcagcgactactttggtcagtatggcgacgtcacacagaccgttatcatgcgcgat
aagaccactgggagacccagaggctttggcttcgtcgtcttctccgatccttctgtgctc
gataacgtccttaatgacaagcacaccattgatggccgagtggtggaggcaaaaagggct
ttatcaagagaagagcagacctcctctaaaactggaaactttaattccagcagaaactct
ggaggtggaggaaactttaagaccaaaaagatttttgttggagggttgccttcaacccta
tcagaagatggatttcgtcaattttttgaaagttttggccatgtaactgatgtagtcata
atgtacgaccagaatactcaacgtcctcgtggttttggtttcataacatttgacactgaa
gaagcagttgatagagtactttataagaacttccatgagttgaatggtaaactagtagaa
gtgaagcgtgcccttcctaaagatgcaaatcctggtggagggggccgtgttgggggctat
caaggttattctggtgcaagtacaaatacatttgatggtcggatggatggcagtagatat
atgcagcctcaaaccgctgcaggtggttttccaccatattctggttacggtgcacctggt
tatggttatggggctgcaagtagtggggttagttatggaggctatggcagttataatgta
ggtggttacggaagtgctggtgcaggatacggtggtcctgcagggtcctatggaaatcta
agtgctcctagtcctggttatgttggtggagcgcctggtgcaatgaaaaatgcttggggc
agccaaactccctctgcttacggggcttctggctatggggctgcggctacttggagtgct
cctgctggtggtggtgccagttctgcgcctagaggtcaatccccaagtggggcttctggg
tatgggagtcaaggttatggatatggcagttatgctggtagttatggatcatactctggt
gcatatggggcgtctggtgggcgtgcagggagtgtcccaaacagcaattcaagtggtgtt
gctagtggaggagatcaccaaggaagtggtagtggctatatgggaagtggctatggtgac
acgaatgggaatacagggtattctaatgcgggatggagatctgatccttcacagcctgct
ggtggttatggtggtactcagtccaggcaggcttaa
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