Ziziphus jujuba (Chinese jujube): 107426075
Help
Entry
107426075 CDS
T04794
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107426075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107426075
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107426075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_14
LRR_8
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107426075
NCBI-ProteinID:
XP_015891657
UniProt:
A0A6P4ABV4
LinkDB
All DBs
Position
9:complement(join(2376638..2377450,2377582..2378074,2379487..2379950))
Genome browser
AA seq
589 aa
AA seq
DB search
MLRMANSFPEEVLEHVFSFIQSDKDRNSISMVCKSWYEIERWCRRRIFVGNCYAVSPRMV
IRRFPEVRSIELKGKPHFADFNLVPEGWGGYVQPWIVAMIGAYPLLEEIRLKRMVVTDDS
LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVDDLSGHWLSHFPD
TYTSLVSLNIACLVSEVSFSALERLVGRCPNLRSLRLNRAVPLERLANLLRRAPQLVELG
TGAYSAELRPDVFSNLAGALSDCKELKSLSGFWDVVPAYLPAVYSTCPGLTTLNLSYATI
QSPDLIKLVSQCQNLQCLWVLDYIEDVGLDALAASCKDLRELRVFPSDPFGMEPNVALTE
QGLVSVSEGCPKLHSVLYFCRQMSNAALLTIARNQPNFTCFRLCIIEPHTPDYLTRQPLD
VGFGAIVEHCKDLRRLSVSGLLTDRVFEYIGTHGKKLEMLSLAFAGDSDLGLHHVLSGCE
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDER
GHPDTRPESCPVEKLYIYRSVAGPRSDMPGFVWTMGGDSDFKPHKLNII
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaatggcgaactcgttcccagaagaggttctggagcacgtgttctcatttata
cagtccgataaggaccggaactcgatctccatggtgtgcaagtcatggtacgagatagaa
aggtggtgcaggaggaggatattcgtcggcaactgctatgccgtcagccctaggatggtg
atcagacggttcccggaggtgagatctattgagctcaaagggaagccccacttcgcggac
ttcaatctggtccctgagggctggggaggctatgttcagccttggatcgttgccatgatt
ggtgcttaccctttgcttgaggagatcaggctcaagaggatggttgtcaccgacgacagc
ttggagctcatagctaagtctttcaagaatttcaaggtcttggtcctctcctcgtgtgag
ggattcagtactgatgggctcgccgccattgctgccaattgcaggaatctgcgagagcta
gacttgcgggagagtgaagtggatgacctgagtgggcattggcttagccattttcctgat
acgtatacctcattggtttctcttaatattgcttgcttagtgtcagaggttagtttctct
gctcttgaacgtcttgtggggcgatgtcccaacttgaggagtcttcggctcaaccgtgct
gtgccccttgagaggctagccaaccttcttcgtcgggcacctcaactggttgagttaggc
acaggtgcttactcagctgagttacgaccagatgtcttctctaacctagcaggagcactt
tcggactgcaaggaactgaagagcttgtctgggttctgggatgtggtcccagcatacctt
ccagccgtttattctacctgccccgggctgacaacattgaacttgagctatgccactatt
caaagccctgatcttatcaagcttgttagccagtgtcagaatttacagtgcctatgggta
ttggattacattgaagatgttggcctcgatgcccttgcagcttcttgcaaggatttaaga
gaattaagagtgtttccatctgacccatttggcatggaaccaaatgtggcattgacagaa
cagggccttgtctctgtttctgaaggctgcccaaaactccactccgttttgtacttttgc
cgtcaaatgtcaaatgctgccttattgaccattgccaggaaccaacctaattttacatgt
tttcgcctttgtattattgagccgcatactcctgattatcttactcgtcagccgcttgat
gtgggttttggtgccattgttgagcactgcaaggatctccggcggttatcagtctctggt
ctcctcaccgatcgtgtgtttgagtatatcggtactcatggtaaaaagctagagatgctt
tctttggcttttgcgggagacagtgacttggggcttcatcatgtgttatctgggtgtgaa
aatcttcggaaactggagattagggactgcccttttggtgataaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcttgctcagtgagttatgga
gcatgtaagctgctaggtcagaagatgcccaggcttaatgttgaagttattgatgagagg
ggacacccagatactaggccagaaagctgccctgttgagaagctctacatttatcggtct
gttgctggtcctaggtccgacatgcctggatttgtttggaccatgggtggagattctgac
ttcaagccccataaattaaacatcatctga
DBGET
integrated database retrieval system
