Ziziphus jujuba (Chinese jujube): 107426442
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Entry
107426442 CDS
T04794
Name
(RefSeq) F-box protein SKIP17
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107426442
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107426442
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
107426442
NCBI-ProteinID:
XP_015892118
UniProt:
A0A6P4B1C9
LinkDB
All DBs
Position
9:complement(join(3112333..3112549,3112660..3112734,3112934..3112998,3113111..3113173,3113253..3113325,3113448..3113512,3114009..3114130,3114224..3114309,3114464..3114574,3114657..3114851,3115054..3115229,3115793..3116128))
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AA seq
527 aa
AA seq
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MDTFLHHIHNPSSMAKRPCPSQNPRFPNLYQLDVDQLLGTLLGLTDSPSLCIDISFERLL
DSAASDSDQTLLIDRALKLGSVLLEAGKRSARKRASKHNSLAWALPPDLTIKVFSMLDTQ
SLCHAAATCSMFNKCAMDPSCYACIDLTTVVPKVNNAVVSTMIHRAGKALQSLKLGVVPG
PSVSAGSCQPLVYTIRNSVDVSNFSWNDKRSRQGKESSILTRSCLSPLAGGSGAPGTLLR
RLHLYNIERMDNTSLCGALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFESSK
TGRDDSLKSPTCVDFVNNCPHLTSLALRGFKLHDYKVRILVKGFRKLKYVDFSTSYSITG
TFLRNLGSSNGGNLLEVLVLRDCMHLKEVEVARLLTGILAGDFKFLKHLDISNREGLASE
SDWYDRCYCSSVIPIKQVLEERPDMCLLAEFPSEGSYIELDQMFESELNSDISLPSQLSS
HTSDGSMFMSFSESSYNSDHGSGNEDVRDAGYVIYEESSDEVDFLAA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggataccttcctccaccacatccacaatccgtcatccatggccaagcgaccttgccct
tcgcaaaaccctagattcccaaatctctaccaattggacgtggaccaactcttaggtacc
ctcttaggccttactgattccccttctctctgcatcgacatctccttcgagaggcttcta
gattccgcagcttccgattcggatcagacccttctcatcgatcgtgctctcaaattaggt
tcagtccttctcgaggctggaaagcgttccgctagaaagcgagcttccaagcacaactca
ctcgcttgggctcttcctcctgacctgaccatcaaagtgttttccatgcttgacacacaa
agcctatgccatgcagcggctacttgttccatgtttaataaatgtgcgatggacccctca
tgctatgcttgtattgacttgacaacagttgtcccaaaagttaataatgcggtagtatcc
acaatgatccaccgagctgggaaagctcttcagtctcttaagcttggtgtagttccaggc
ccaagtgtgtcagctggatcttgtcagccattggtttataccatcaggaattctgtagat
gtatccaacttttcatggaacgataagaggtccagacaagggaaggaatcatccattctt
acaagatcctgtttaagccctttggcggggggcagtggtgccccagggactcttttgaga
aggttgcatctttataatattgaaagaatggacaacacatctctttgtggggcattatca
gcctgtccatctctccttgatttggaaatagtcggccttcatgtcgagctgaggcaaaca
ctgatgtcagtgagtgcaaactgtcacttgatagagcgcttgttctttgaatcttcaaaa
acaggtagagatgacagtttgaaatcaccaacttgtgttgattttgtaaataattgtccc
catctaacgtcattggctctcagaggatttaaactgcatgattataaagttcgcatactt
gttaagggatttagaaaactaaagtacgttgatttttcaacatcttactctatcactgga
acgtttcttaggaaccttggaagcagcaacggagggaatctgctggaagttttggtttta
agggattgtatgcatctcaaagaggtggaagttgctcggcttttgacaggaattctagct
ggggatttcaagttcctcaaacatcttgacatatccaatagggaaggcttggcttctgag
agtgactggtatgacagatgctattgctctagcgtaattcctataaagcaggtattggaa
gagaggcctgatatgtgtttgctggctgaatttccatctgaaggaagttacatcgagctt
gatcaaatgtttgaaagtgaacttaatagcgatatcagcctgccatcacaactgagtagt
catacatcagatggttcaatgtttatgagtttttctgagagcagttataatagtgaccat
ggtagtggtaatgaggatgtgcgggatgcaggttatgtaatttatgaggaaagttcagat
gaggtggattttcttgccgcgtga
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integrated database retrieval system
