KEGG   Ziziphus jujuba (Chinese jujube): 107426554
Entry
107426554         CDS       T04794                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107426554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107426554
   03110 Chaperones and folding catalysts [BR:zju03110]
    107426554
   03029 Mitochondrial biogenesis [BR:zju03029]
    107426554
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107426554
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     107426554
Messenger RNA biogenesis [BR:zju03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     107426554
Chaperones and folding catalysts [BR:zju03110]
 Heat shock proteins
  HSP60 / Chaperonin
   107426554
Mitochondrial biogenesis [BR:zju03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    107426554
Exosome [BR:zju04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107426554
  Exosomal proteins of other body fluids (saliva and urine)
   107426554
  Exosomal proteins of breast cancer cells
   107426554
  Exosomal proteins of colorectal cancer cells
   107426554
  Exosomal proteins of bladder cancer cells
   107426554
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 107426554
NCBI-ProteinID: XP_015892245
UniProt: A0A6P4B1M4
LinkDB
Position
9:join(6039568..6039605,6039721..6039745,6039878..6040009,6040269..6040428,6040693..6040868,6040998..6041093,6041302..6041406,6041539..6041625,6041706..6041795,6041897..6041977,6042637..6042705,6042969..6043046,6043186..6043281,6043426..6043525,6043613..6043716,6044181..6044286,6044396..6044474,6044578..6044683)
AA seq 575 aa
MYRFTTSLASKARLIKNSTQQIGSWPSWRRNYAAKDIKFGIEARALMLRGVEELAEAVQV
TMGPNGRNVILEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT
TCATILTRAIFTEGCKSVAAGINAMDLRRGITMAVDAVVTNLKSRTRMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLHNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLILIHEKKISNLNAIVKVLELALKRQRPLLIVAEDIESDALATLIINKLRA
GIKVCAIKAPGFGENRKANLQDLAILTGGEVITEELGLNLDKVGLEMLGTCKKITVSKDD
TVILDGAGDKKNIEERCDQLRSTIESSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLQTANFDQKIGIQIIQNALKM
PVHTIASNAGVEGPVIVGKLLEQENPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDENEARGVPPGMGGLDY
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgtatcgcttcaccacgagccttgcctccaaagccagattaattaagaacagcactcag
cagattggtagttggccgagttggagaaggaactatgcagccaaagacattaaattcggt
atcgaagctcgtgctttgatgcttaggggtgttgaagagcttgctgaagctgttcaagtg
acaatggggccgaatggccgcaatgttatcctggaacaaagttttggggcccctaaggtg
acaaaagacggtgttactgttgcaaaaagtattgaattcaaagacagagtcaagaatgtc
ggtgctagtcttgtaaagcaggttgcaaatgcaacaaatgatgtggcaggcgatggtacc
acttgtgccacgatcctaacccgagctatatttactgaaggctgcaagtcagtggcagca
ggaataaatgctatggacctaaggcgtgggattaccatggcagttgatgctgttgtaaca
aacttgaaaagtaggacaaggatgatcagtacatctgaagaaattgcacaggttggaaca
atatctgctaacggagaaagagaaatcggtgagctaatagctaaagctatggagaaagtt
ggcaaagaaggtgtcatcaccatctctgatgggaaaacactgcataacgagttagaagta
gttgaaggaatgaagttggacaggggatacatatccccatatttcatcaccaatcagaag
aaccaaaaatgtgaattggaagatcccctcatattaatccatgagaagaaaatctcaaac
ctaaatgctatagtaaaagtactggagttggctttgaagaggcaaaggccactattgatt
gttgctgaagacatagaaagtgatgcactggctactctcattataaacaaacttcgtgct
ggaatcaaggtttgtgcaattaaagcccctgggtttggagaaaacaggaaggccaatttg
caggatcttgcgattcttactggaggcgaggtaataactgaagaacttggtttgaacctt
gacaaagttggactagaaatgcttggcacttgcaaaaagattacggtatcaaaggatgac
actgtcattcttgatggagctggtgacaagaaaaacattgaagaaagatgtgaccagctg
aggtcaacaattgaatcaagcacttctgattatgataaagaaaaattgcaagaacggctt
gcaaagctttctggtggtgttgctgtcttaaagattgggggagctagcgaagcggaagtt
ggtgagaagaaggatagagttactgacgctctaaatgccaccaaggctgctgtggaggaa
ggaatcgtccctggtggtggtgttgcacttctatatgcctccaaggaactggagaagttg
caaactgctaactttgatcaaaagattggtatccagataatccagaatgcactcaagatg
cctgtgcatacaattgcttccaatgctggagttgaaggcccagttattgttggcaagctg
ttggagcaggaaaatcccgaccttgggtatgatgcagcaaaaggtgaatatgtggacatg
ataaaggcaggaattattgatccattgaaagttattagaacagccttagtcgacgctgca
agtgtttcgtcattgttgactacgactgaggcagttgttgtcgaacttcccaaggatgaa
aatgaagcccgtggagtgccacctggcatgggaggcttggattattag

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