Ziziphus jujuba (Chinese jujube): 107426708
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Entry
107426708 CDS
T04794
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00100
Steroid biosynthesis
zju00909
Sesquiterpenoid and triterpenoid biosynthesis
zju01100
Metabolic pathways
zju01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107426708
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107426708
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zju01006
]
107426708
Enzymes [BR:
zju01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107426708
Prenyltransferases [BR:
zju01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107426708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
107426708
NCBI-ProteinID:
XP_015892440
UniProt:
A0A6P4ATA1
LinkDB
All DBs
Position
9:complement(join(8668352..8668420,8668509..8668554,8668645..8668736,8669208..8669296,8669582..8669657,8670607..8670753,8670888..8670992,8671086..8671229,8672417..8672486,8672612..8672687,8673227..8673316,8673893..8673935,8674407..8674601))
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AA seq
413 aa
AA seq
DB search
MGSLGTMLRHPDDFYPLLKLKIAVRHAGKQIPPEPHWSFCYSMLHKVSRSFALVIQQLDT
DLRNAVCIFYLVLRALDTVEDDTSIPADVKVPILKAFHRHIYDRDWHFSCGTKEYKVLMD
QIHHVSTAFLELGEGYKEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLAGDDISNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKDEENSDKAVQCLNDMVTNALIHVEDCLKYMSALRDPAIFRFCAIPQVMAIGTLAMC
YNNIEVFRGVVKMRRGLTAKVIDRTRTMADVYRAFYDFATMLKSKVDMNDPNAKKTLSRL
EIAQKACKDSGVLSTRKSYILKNQSRYNPALIALLFIILAIIFAYLSANRSNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtttggggacgatgctgaggcacccagatgatttttacccgcttctcaagctc
aagattgccgtcaggcacgccgggaagcagattcctccggagcctcactggagtttctgc
tatagcatgcttcacaaagtttctcgcagtttcgcactcgttattcaacagctcgatact
gacctccgtaacgctgtatgcatattttatctggttcttcgagctctcgacactgttgag
gatgatacaagcatacctgccgatgttaaggtgcctatcctgaaagcatttcatcgccac
atatatgatcgtgactggcatttctcatgtggtacaaaagaatacaaagttctcatggac
cagattcatcacgtatcaaccgcttttctggaacttggagaaggttataaggaggcaatt
gaggatattaccaaaagaatgggagcaggaatggcaaaatttatttgcaaggaggtggaa
acagttgatgactatgatgaatattgccactatgtggcaggacttgtgggtctaggtttg
tccaagctatttcatgcctctggtaaggaggatttggctggagatgatatttcaaattca
atgggcttatttcttcagaaaacaaatatcattagagattatctggaggacattaatgaa
ataccaaagtcgcgcatgttttggccacgccagatttggagtaaatatgttaacaaactt
gaggacttgaaagatgaggaaaactcagacaaggcagtgcaatgcttgaatgacatggtc
accaatgctttgatacatgtggaagattgcttgaagtacatgtctgctttaagagatcca
gctatatttcgattttgtgccattcctcaggttatggcaattggtacattagcaatgtgc
tacaataacattgaagtcttcagaggtgtagtgaagatgaggcgtggtcttactgcaaaa
gtcattgaccgaactaggacaatggctgatgtctatcgtgctttctatgattttgctact
atgctaaagtccaaggtggacatgaatgatcctaatgcaaagaaaacattgagtaggctg
gaaatagcacagaaagcttgcaaggattctggtgttctaagtacaagaaaatcatacata
ctcaagaatcagtcgagatacaatccagcgctgattgccttattgttcattatattggct
attatttttgcttatctttctgccaaccgatcaaataactag
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