Ziziphus jujuba (Chinese jujube): 107426814
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Entry
107426814 CDS
T04794
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107426814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zju03400
]
107426814
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107426814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
TRADD-like_N
Motif
Other DBs
NCBI-GeneID:
107426814
NCBI-ProteinID:
XP_015892590
UniProt:
A0A6P4ADT8
LinkDB
All DBs
Position
9:complement(join(8924878..8924881,8924976..8926720,8928086..8928238,8928842..8929027,8929756..8930234,8931121..8931169))
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AA seq
871 aa
AA seq
DB search
MEPAIDALSSNYNGYSGLYSRGHKRLKMSNDGKDRDRMACSSSGETALNKPRTASRVIDF
SDPFAIPNLLEGFDSGRYGSVTKQIEELCARKLQALNPLFIKFPTLTSKPIESVDNYIDL
EDDCIVDEAPPPAAPLPVVIIDSDEEDKEDLKPSFTFQNVILAHPSQESFMKDGMVARDL
PDSRAWTEHKRLSAETELKKDKGVYLGVEDLSDQQTDDEDDGLEDVWKEMSMVLETSKDA
PLDFPSDEREDEGDCEHSFVLKDDLGYVCRVCGVIERGIETIFDFQYVKVRSTRTYAHES
RKDKESTETVGVKLSEEDLVVTEICAHPRHKKQMRPHQVEGFNFLVSNLVGDNPGGCILA
HAPGSGKTFMIISFVQSFLAKYPHARPLVVLPKGILATWKKEFQIWQVEDIPLLDFYSLK
ADSRLQQLEVLKQWVEQKSILFLGYKQFSSIICDVETSKASASCQEILLKAPSILILDEG
HTPRNENTDVLQSLAKVQTARKVVLSGTLYQNHVKEVFNILNLVRPKFLRMETSRPICKR
IMSKVDISGVKKQFKSGVDASFYDLVEHTLQKDKDFSRKVSVIRDLREMTSKVLHYYKGD
FLDELPGLVDFTVILNLSSKQKQEAQKLRKLARKFKVSSVGSAVYLHPKLNSFTERCSTA
DQKMDELLGKINLRDGVKAKFFLNLLKLCESTGEKLLVFSQYLLPLKFLERLSVTVRGWC
LGREIFVISGESSSEQREWSMERFNNSPDAKIFFGSIKACGEGISLVGASRIIVLDVHLN
PSVTRQAIGRAFRPGQQKKVYVYRLVAADSPEEADHRSCFKKEFISKMWFEWNEYCGYQD
FEVETVDVKECGDLFLESPLLQEDVKVLYRR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagcaattgatgcattgtccagtaactacaacggatacagtgggttgtatagt
agaggacataaaagacttaaaatgtccaatgatggaaaagatcgagataggatggcctgc
tcttctagcggtgaaacagctttgaacaaaccaagaactgcttctagggttattgatttt
tctgatccattcgctattcccaacctgctagaagggtttgactccggtagatatggaagt
gttacaaaacaaatagaagagctttgtgctcggaagctacaagctctaaacccacttttc
ataaagtttccaacactaacaagcaagcctatagaaagtgtagataattacattgatttg
gaggatgattgcattgtagatgaggctccacctccagcagcaccattgcctgttgtcatt
attgattcagatgaggaagacaaagaagatttgaagccatcttttacttttcagaatgtc
atcttggcacatccatctcaagaatcttttatgaaggatggcatggtggctagggacctt
ccagatagcagagcttggaccgaacacaaaaggctttctgctgaaactgaactaaagaag
gataaaggtgtgtatctaggtgtagaagatctaagcgatcagcagactgatgatgaagat
gatggtttggaggacgtttggaaggaaatgtcaatggtattagaaacgtccaaggatgct
ccattagattttccatctgatgaaagagaagatgagggtgactgtgaacattcttttgtt
ttaaaggatgaccttggatatgtttgtcgtgtttgcggggttattgagagaggaattgag
accatatttgacttccagtacgttaaggtaagaagtacccgtacttatgctcatgagtct
cggaaagataaagagtcaacggagacagttggggttaaattatctgaggaagatttggtg
gtaactgaaatatgtgcccacccaagacataagaagcaaatgagacctcatcaagtggag
ggtttcaattttcttgtcagcaacttggtaggtgataatcctgggggttgtatcttggcc
catgctcctggatcaggaaagacattcatgataatcagttttgtacaaagttttctggcc
aagtatcctcatgcgagaccactcgttgttcttcctaaaggaatcttagctacatggaag
aaggagtttcagatttggcaagtagaggatattccactgcttgatttctactctctcaaa
gcagatagcagattgcagcaactggaggtgttgaaacagtgggtggaacagaagagtatc
cttttcctagggtacaaacagttttcctccattatttgtgatgttgaaaccagcaaggca
tcagcttcgtgccaagaaatactgcttaaggctccatcaattcttattcttgatgagggg
catactccaaggaatgagaacacagatgtgttgcagtctcttgccaaagtgcaaacagct
agaaaagttgtgctttcaggaaccctctatcaaaatcatgtcaaagaggtattcaatatc
ttgaatcttgtgcgtcctaagtttttgaggatggaaacttcccgacccatatgtaagcgc
atcatgagtaaagttgacatatcgggtgttaagaagcagtttaaatctggtgtggatgca
tccttttatgatcttgtggagcatactttgcaaaaagataaggatttcagtcgaaaagtc
agtgtaatacgtgacttacgagagatgaccagcaaagtcctacattattataaaggagat
ttcctggatgagcttcctggacttgttgatttcacagtgatactgaatttaagctctaaa
cagaaacaagaagctcaaaagttaaggaagttggctaggaagttcaaggtaagttctgtt
ggaagtgcggtttatctgcacccaaagttgaactcatttactgagaggtgttccacggct
gatcagaagatggatgagctgttggggaagataaatcttagagatggagtaaaggcgaaa
ttcttccttaacctgcttaagctttgtgagtcaacaggtgagaagcttctggttttcagc
cagtaccttttacctctaaaatttttagagagattgtcagtaacagtaaggggctggtgt
cttggaagagaaatttttgtaatctcaggtgagtcaagttctgagcaacgggagtggtca
atggagcgatttaataactcccctgatgctaagattttttttgggtcaatcaaggcttgt
ggagagggcatatctctagtaggggcatctagaataatagttttggatgtccatttaaat
ccatcagtgactcggcaagcaataggtcgtgcatttcgaccggggcagcagaaaaaagtc
tatgtttatagattggtcgctgccgattcacctgaagaggcagaccacagatcttgtttc
aagaaggaattcatttcaaaaatgtggtttgaatggaatgagtactgtggttatcaggat
tttgaagttgaaactgttgatgtcaaagaatgtggtgatctcttcttggaaagccctttg
ttgcaggaagatgtgaaggttctgtacaggaggtag
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