KEGG   Ziziphus jujuba (Chinese jujube): 107426915
Entry
107426915         CDS       T04794                                 
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107426915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107426915
   03036 Chromosome and associated proteins [BR:zju03036]
    107426915
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     107426915
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    107426915
   RSF complex
    107426915
   WICH complex
    107426915
   B-WICH complex
    107426915
   NORC complex
    107426915
   BRF complex
    107426915
   NuRF complex (fruit fly)
    107426915
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE Helicase_C ResIII HAND Myb_DNA-binding DEAD HDA2-3 DBINO CHDII_SANT-like AAA_14 DUF1870
Other DBs
NCBI-GeneID: 107426915
NCBI-ProteinID: XP_015892710
UniProt: A0A6P4AU99
LinkDB
Position
11:join(26229391..26229627,26230060..26230176,26230309..26230415,26230549..26230652,26230836..26230933,26231107..26231286,26231371..26231592,26231674..26231808,26231908..26232190,26232267..26232340,26232470..26232690,26232772..26232859,26232949..26233042,26233158..26233346,26233498..26233529,26233679..26233755,26233842..26233931,26234037..26234106,26234211..26234265,26234348..26234406,26234482..26234647,26235174..26235352,26235450..26235665,26235808..26235909,26236012..26236029)
AA seq 1070 aa
MAKPSKPQASSDEAMSNDSNSSEEEQVNDQINEEEDDEELEAVARSASDDDDEEAATGTG
DSPASDEDVADADNGADEEVSAEISKREKARLKEMQKMKKQKIQEILDAQNAAIDADMNN
KGKGRLKYLLQQTELFAHFAKGDHSSSQKKVKGRGRHASKLTEEEEDEEYLKEEEDGLGN
TRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFR
GITGPHMVVAPKSTLGNWMNEIKRFCPVLRAIKFLGNPEERRHIRENLLVAGKFDVCVTS
FEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHE
LWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPP
KKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEP
GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCR
IDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ
AQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDEL
LQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAEL
YDFDDEKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRM
PQLHDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVDEPEDVGDPLTAEELEEKER
LLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELND
YDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMI
CMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEHDERE
RQARKEKKLAKNMTPSKRAMARQATESPSSLKKRKQSTMDDYVGTGKRRK
NT seq 3213 nt   +upstreamnt  +downstreamnt
atggcgaaaccctcaaagccacaggcgtcttccgacgaagccatgtccaacgactccaat
tcgtcggaggaagagcaggtcaatgaccagatcaacgaggaagaggatgatgaggagctc
gaagccgtcgctaggtccgcttctgatgacgacgacgaagaagctgccaccggcaccggt
gattcgccggcttccgatgaggacgttgccgacgccgataacggtgccgacgaggaggtc
agtgctgaaattagcaagcgtgagaaggccagacttaaagaaatgcagaaaatgaagaaa
caaaagattcaggaaatattggatgcacaaaatgcagccattgatgctgatatgaacaat
aaggggaagggacgcttgaaatatctcctacagcaaacagagttgtttgcccattttgct
aaaggtgatcattcttcatcacagaagaaggtaaagggaaggggtcgccatgcatcaaaa
ttaactgaagaggaagaagatgaagaatatctaaaagaggaagaagacggtttaggaaac
actcgtttggttacacaaccttcttgtatacaaggaaagatgagggattaccaacttgct
ggattaaattggcttataagactttatgagaatggtataaatggaattcttgcagacgaa
atggggcttggtaaaacattgcaaactatctccttgttgggctacctgcatgagttcagg
ggaattactggccctcatatggtagttgctccaaaatctactcttggaaattggatgaat
gaaataaagcgcttttgccctgttttgcgtgctataaagttccttggtaatccagaggaa
aggaggcatatacgagagaacttactggttgctgggaagtttgatgtatgtgttacaagc
tttgaaatggctatcaaagagaaaactactttacgccgatttagctggcgctatataata
attgatgaagcccatagaatcaagaatgagaattctctcctttcaaagactatgaggctc
tataataccaattatcgccttttaattactggtacaccgctccagaacaatcttcatgaa
ctctggtcgctgttaaactttcttctgcccgagatatttagttcagctgaaacgtttgat
gagtggtttcaaatttctggtgaaaatgatcagcaggaggttgttcaacaacttcacaag
gtcctacgcccgtttcttcttcgaagattgaagtcggatgtggagaaaggtttacctcct
aaaaaggaaactatacttaaagtgggcatgtcgcaaatgcagaaacagtactatagggct
ttactgcagaaagatcttgaagttgttaatgctggtggagaacgcaagcgtcttttgaat
atagcaatgcagcttcgtaaatgctgtaatcatccatatcttttccaaggtgctgaacct
ggtcctccatacaccactggcgatcatcttattacaaatgctggtaaaatggttcttttg
gataagttgcttccaaagctaaaagagcgtgactcgagggtcctaatattttcacagatg
acgaggctgctagacattcttgaagattatttgatgtttcgtggatacctgtattgtcga
attgatgggaacactggtggagaagaccgtgatgcttccattgaggcctttaataagcca
ggaagtgagaaatttgttttcttactatcaaccagagctggaggtcttggtattaatctt
gccactgcggatgttgtcattctttatgatagtgattggaacccacaagttgatctgcaa
gcacaggaccgtgctcacaggattggtcaaaagaaagaagttcaagtctttcgattttgc
acggagtatactattgaggaaaaagtgattgagagggcgtacaagaagcttgcacttgat
gctttggtgattcaacaaggacgattagctgagcagaagaccgttaacaaagatgagtta
cttcaaatggtgaggtttggtgctgaaatggttttcagttccaaggatagcacaattaca
gatgaggacattgacagaatcatagcaaagggagaagaggcaacagctgagcttgatgca
aagatgaagaaatttactgaagatgcaatcaaatttaaaatggatgacacggctgaacta
tatgattttgatgatgagaaggatgagaataagtttgacttcaagaaaattgttagtgaa
aattggattgagccgccaaaaagagagcggaagcgcaattactctgagtctgagtacttt
aaacaaacaatgcgccagggtggtccagctaaaccaaaagaacctcggattcctcggatg
cctcaattacatgatttccagttttttaacacacaaaggttgagtgaactgtatgagaaa
gaagtgcgatatctcatgcaaacacatcaaaagaaccagttgaaagatacgatagatgtg
gatgagcctgaagatgttggagatccattgactgctgaagagttggaggagaaggagcgg
cttctagaagagggattttcttcatggagtaggagggatttcaatacattcattagggct
tgtgagaagtatggccgaaatgatataaagagtattgcttctgaaatggagggtaaaacc
gaggaggaagttgagagatatgcaaaagtattcaaagaaagatacaaggagttaaatgat
tatgataggattattaagaacatagaaagaggggaggctaggatttctcggaaagatgaa
attatgaaagctattgggaagaaattggatcgctacaagaatccatggctggagctaaag
atccaatatggtcagaacaaagggaagttatataatgaagaatgcgatcgtttcatgata
tgcatggtccacaagcttgggtatggaaactgggatgagttgaaggcagcatttcggaca
tcccccttgtttcggtttgattggtttgtcaagtctcgtacaactcaggaacttgccagg
aggtgtgatacattaatacggttagtggagaaagaaaaccaagaacatgatgagagggag
aggcaggctcggaaagagaagaagcttgctaagaatatgacaccatcaaagcgggccatg
gctaggcaggcaactgagagtccctcttccctaaagaagaggaagcaatcaaccatggat
gattatgttggcacgggaaaaaggcggaaatga

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