KEGG   Ziziphus jujuba (Chinese jujube): 107427069
Entry
107427069         CDS       T04794                                 
Name
(RefSeq) protein CHROMATIN REMODELING 25
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107427069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zju03400]
    107427069
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     107427069
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 SLFN-g3_helicase RMC1_N
Other DBs
NCBI-GeneID: 107427069
NCBI-ProteinID: XP_015892890
UniProt: A0A6P4ACU1
LinkDB
Position
9:complement(join(11641818..11642186,11642460..11642558,11642645..11642834,11643652..11643710,11643788..11643865,11643966..11644049,11644165..11644278,11644372..11644491,11645168..11645300,11645384..11645475,11645922..11646008,11646123..11646197,11646633..11646683,11646920..11647015,11647577..11647663,11647742..11647798,11647911..11648036,11648103..11648343,11648486..11648572,11648888..11649268,11649551..11649780))
AA seq 951 aa
MEDEDEILSDSEESEPSDSSDEFTVDRKEYEEEEEEEEGEEDLQDDAVCENQHPRRISQL
PPPIEDRKSKNVDALVRGNLVVRRQSLLPRVLSVTEGSAVCRKPFKPPCSNGYLDQNENL
TRRLWARKRFVPWGSSRPALVAITNRFYIPNAVEKIVEEESVTLPPGVEPLILWQSEDSE
HAAASVVQIVVDPLLVRFLRPHQREGVQFMFECVSGLCSSANIYGCILADDMGLGKTLQS
ITLLYTLLRQGFDGKPMAKKAIIVTPTSLVSNWEAEIKKWVGERVELIALCESTRDDVVS
GIDSFTSPHSSLQVLIVSYETFRMHSPKFSHNESCDLLICDEAHRLKNDQTITNRALAAL
PCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAHFRRYYEAPIICGREPTASDEQRK
LSVERSAELSGKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSDLYNHFIHSKNVKR
AISEELKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMFSGRSGS
WTGGDGAWVELSGKMHVLARLLAHLRQGTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRL
DGTTSISKRQKLVNRFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA
AARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQIDNLTAQVNVLSTE
DLRDLFTFHENVRSEIHEKMNCIRCQNHNDMPENVVNGDDNQSISTSCQSDEDTADIGGF
AEITGCLGKLKSSEKQVGVPLEEDLGSWGHHFFSTSVPDAILQASAGDEVTFIFTNQVDG
KLVPIDSTKSPKVQAAEENDNHLKLKKNLNQKTMLMSRHKRSIESVLSNQNSTRSAFSIS
CKPSQRAAVKCVRASLKGSVDELLKSKLSAGNQLPQKRLSPDTVGHDDDFA
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggaggacgaagacgaaattctttccgattcagaagaatctgaaccttccgattccagc
gacgaattcaccgtcgaccgcaaagaatatgaagaagaagaagaagaagaagaaggagaa
gaagacctccaagacgatgccgtatgcgagaatcagcacccaaggagaatttctcagctg
ccaccgccaattgaagaccggaaatcaaagaatgtggatgctctcgtcagaggcaacctc
gtagtgagaagacagtcgctgcttccgcgagttctatcagtgactgaagggtctgctgtt
tgtaggaagccttttaaaccaccttgctctaatggctaccttgatcagaatgagaatctt
actcgtcgtctctgggcccgtaaacgatttgttccttggggttcttcgagaccagctttg
gtggcaattacgaatcgtttctatataccaaatgctgtcgagaaaattgtagaggaggag
agtgtgacactgccacctggggttgaacctttgatcttgtggcaatctgaagattctgag
catgcggctgctagtgtggtgcagatagtggtagatccattgcttgtccgtttcctacga
ccacatcaaagagaaggtgtacagtttatgtttgaatgcgtttcggggttatgtagttct
gcaaacatttatggttgcatactggctgatgatatgggtttgggaaagacattgcagtca
atcacattactttacactcttcttcgtcaagggtttgatgggaaaccaatggctaaaaag
gctattatagtcactcctaccagtcttgtaagcaactgggaggctgaaatcaagaaatgg
gttggagaaagagttgagctcattgctctatgtgaaagtaccagagatgatgttgtttct
ggaattgactcattcacaagtccccacagctcattacaggttcttattgtttcgtatgag
acattccggatgcattcaccaaaatttagtcacaatgaatcttgtgaccttctaatatgc
gatgaggctcacaggctcaaaaatgatcagacaattaccaatcgggcattggctgctttg
ccatgcaagcggcgaattttgttgtctggaactccaatgcagaatgacctagaagagttc
tttgccatggtaaattttactaatccaggaattttaggtgatgctgcccattttcgccgc
tattatgaggcacctattatatgtggaagagaacctactgcttctgatgaacagaggaag
ctaagtgttgaacgatctgcagaactaagtggcaaagttaaccagtttatattgcgtagg
acaaatgcactactgtcaaatcatctgccaccaaagatagttgaagttgtttgttgcaag
ttgactcctctccaatctgacctatataatcattttatacattctaaaaatgttaaaagg
gccatttctgaggaattgaagcaatcaaaaattttggcttatataacagcacttaagaag
ctttgcaatcatccaaagctcatttatgacactataagaagtggaagtccaggaacttca
ggttttgaggactgtattcgctttttccccccagagatgttctccggaagatctggatca
tggactggaggagatggggcttgggttgaactgtctggaaaaatgcatgtcttagctcgg
ttactggctcacttacgtcaagggactgatgaccgtattgtactcgtctcaaactatact
cagacgctggacctttttgctcagttgtgtcgtgaaagaagatacccatatttgaggctt
gatggaacaacatccatcagtaaaagacagaagctagtgaaccgttttaatgatccatca
aaggatgaatttgtgtttctcttaagtagcaaggctggtggttgtggtctcaatttgata
ggtggaaatcggctagttttgtttgatcctgattggaatcccgccaatgataaacaagct
gctgcaagagtctggagggatggacaaaagaaaagagtattcatatatagatttttgagt
actggaaccatcgaagaaaaggtgtaccagcgtcagatgtcaaaagaagggcttcaaaaa
gttatccaacaggagcaaatagataacctcacagcacaggtaaatgttctttcaacagaa
gatctccgtgatctattcacctttcatgagaatgtgagatctgaaattcatgaaaagatg
aactgcatccgttgtcaaaaccataatgacatgcctgagaatgtagttaacggagatgac
aatcagtcaatcagcacaagttgtcagtctgatgaagacactgctgatataggtggattt
gcagaaattacaggatgcttaggcaagttaaagagctcagagaaacaggtaggtgtacct
ctagaagaagatttaggaagctggggtcatcatttcttctcaacttcagtacccgatgct
attttacaagcttcagctggggatgaggtgacatttatttttacaaaccaagtagatggg
aagcttgtacctattgactcaacaaaaagtccaaaggttcaggctgcagaagaaaatgac
aatcatctcaagttaaagaaaaatctaaaccagaaaaccatgttaatgtctcgacataaa
aggtcgatagaatctgttctttccaatcaaaattctaccaggagtgccttttctatctct
tgcaagccttcacaaagggcagctgtgaaatgtgtgagagcttctttaaagggctcggtg
gacgaattattgaagtctaaactctctgctgggaatcaattacctcagaaacgattgtct
cctgatactgtgggacacgatgacgattttgcgtaa

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