KEGG   Ziziphus jujuba (Chinese jujube): 107427169
Entry
107427169         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107427169
  KO
K13114  pinin
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107427169
   03015 mRNA surveillance pathway
    107427169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107427169
   03041 Spliceosome [BR:zju03041]
    107427169
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107427169
Spliceosome [BR:zju03041]
 Complex C
  Other components
   EJC/TREX
    107427169
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 107427169
NCBI-ProteinID: XP_015893005
UniProt: A0A6P4B3M2
LinkDB
Position
9:join(16796281..16796355,16796446..16796556,16796760..16796825,16797107..16797277,16797402..16797515,16798518..16798589,16800382..16800465,16800584..16800684,16801015..16801099,16803119..16803505)
AA seq 421 aa
MGSAQLKTEEELRKEIDELQRQQREITERLRDPRGLRRGRLSGAGPRNFAANGARQRSFS
RYGDRVDAEDQPPAKRRLSSAVVKVEDGEITEDAEEAKDVLNDAANKGTAGTAADTSDRK
SFNLQQSGWSRKDGNQRAVKKDFEVLATEHVPRVLPKDEDPSLINRNKRMLGQLLGTLEK
FRKEDMKLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREKIAEKRRRDLTLRARVAAK
TEEKKLELLFLRWSEHHKKLCKFIRTKAEPPIYYMPSRPMDEDSTLVEHQKEQAFLEWQT
ARRAELSEYQKQIGDQYIANVEKELERWQNARKVKKANNDMLNLQETMDKELDTHRLEHG
PKKRKIPDGSNNEEDDDDVEDINVGEDDIMDDVLDVDDNNRRADETARPDADTASPIADK
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgggaagcgcccagttaaagacagaggaagagctccgtaaggagattgatgagctccaa
cgccagcaacgcgagattacagagcggcttcgagatccaaggggacttcgtagggggcgc
ttatcgggcgctggtcctcgcaactttgccgccaatggagctcgtcaaagaagcttctct
cgatacggagatagggtcgatgcagaagatcaacctccagctaaacggcgactttcttca
gccgttgtcaaggtggaagatggggagatcactgaggatgccgaggaggcaaaggatgtg
ctgaatgatgctgctaataaaggaactgctgggactgccgctgatacgagcgataggaag
tcatttaatctgcagcagagtggttggtctaggaaggatggcaaccaaagagctgtgaaa
aaggattttgaagttctggctactgagcatgttccaagggtattgccgaaggatgaggac
ccgagcttgattaataggaataaaagaatgctggggcagcttttggggacgttagagaaa
ttcaggaaagaagatatgaaactttcaggaactgaagcattcatgcggagatcggattct
ttgcaaagagctgagcaaagagcacgtgaagaaagtgaaaggctcaggcaacaagagcgt
gaaaagattgcagaaaagcggaggagagatctgactttacgggcccgtgttgctgccaag
acagaagagaagaaattggaattgctgtttcttcggtggagtgaacaccataaaaaactt
tgcaaatttataaggaccaaggcagagcctccaatatattatatgcctagcagaccaatg
gatgaagattcaaccttggttgagcatcaaaaggaacaggcattcctagaatggcagact
gccaggagagcagaattgtccgagtatcagaaacagatcggtgaccaatatattgccaat
gttgaaaaggagttggaaaggtggcaaaatgcaaggaaagtaaagaaagcaaacaatgat
atgttgaacttgcaggaaacaatggacaaagaattggacacccataggcttgagcatggt
cccaagaaaagaaaaattcctgatggaagcaacaatgaagaagacgatgatgatgtggag
gatatcaatgttggggaggatgacattatggatgatgtgctagatgtggatgacaacaac
aggagggctgatgaaacagctaggccagatgctgatactgctagtccaattgctgataag
gattaa

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