KEGG   Ziziphus jujuba (Chinese jujube): 107427189
Entry
107427189         CDS       T04794                                 
Name
(RefSeq) dicer-like protein 4
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zju03036]
    107427189
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    107427189
   microRNA pathway
    RISC loading complex
     107427189
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21
Other DBs
NCBI-GeneID: 107427189
NCBI-ProteinID: XP_060673287
LinkDB
Position
1:complement(join(30760472..30760631,30760770..30760890,30760967..30761285,30762900..30763226,30764067..30764339,30764476..30764940,30765506..30765715,30765881..30766086,30774059..30774159,30774410..30774846,30775202..30775476,30775557..30775822,30775952..30776158,30776243..30776403,30776964..30777156,30778494..30778590,30778831..30778969,30781869..30781997,30782081..30782224,30783303..30783367,30785358..30785430,30785518..30785658,30786553..30786663,30787671..30787848,30788188..30788276))
AA seq 1628 aa
MGLTSVVGDDEESSSRVQNPEKDPRKIARKYQLDLCKKAMEENIIVYLGTGCGKTHIAVL
LIYELGHLIRRPQKSVCVFLAPTVDLAQQQARVIEDSIDFKVGVYSGSFKGLKSHEDWEK
QMKQYEVLVMTPQILLRNLSHCFIKMEFIALLIFDECHHAQVNSNHPYAEIMREFYKSNA
TNLPRIFGMTASPVVGKGACSEGNLPKSINSLEKLLDAKVYSVEDKEELDSVVASPLVRV
YHYGSVENGASSPYLPYCSNLDEIRRQCISTLSRKTDDYQSLRSTKKMLNRLHDNLLFCL
ESLGLWGALQASRILLSGDYYERNELVEGEGSYSDDSLCDRYLAQAADMFSSACKGDGIE
FDLSHLEIFKEPFFSRKLVRLIGILSTFRLQPNMKCIIFVNRIVTARSLSYILQNLKILE
SWKCSFLVGVHSGLKNMSRKTMNIILEKFRSGELNLLIATKVGEEGLDIQTCCLVIRYDL
PETVASFIQSRGRARMRESEYVLLVDSGNEKEVNLIENFKKDEDRINLEITSRTSSETFI
GLEESTYKVDSSGASISSGYSISLLHQYCSKLPHDEFFDPRPKFFYLDDIEGTVCHAILP
SNSPLHQIISSPRSSMDAAKKDACLKAIEELHKLGALNDYLLPGKENATLEEPVLNPSVS
DSRKDEGSRGELHEMLVPATLKYPRNRGDIPVYLNSYYIKFSPEPNDRTYKSFGLFVKEP
LPAEAEKMELDLHLARGRSVMTKFVPSGVAEFDKDEIMLAQNFQEMFLKVILDRNEFVSE
FVELGNNDSRKASSLTFYLLLPVTFDDNENTMSIDWNVIRRCLSSPVFRTPVDALDENIL
PSDIQLELANGCKSRRDIENSLVYAPHKNLFFFITNVVFDKNGYSPYKDSGTLSYAEHLN
KKFGIQLGNPRQPLLHAKPLFCLHNLLHNRRQGHSGPSKLDEYFICLPPEICHLKILGFS
KDIGSSISLLPSIMHRVENLLVAIELKNVFSASFPEGSEVTAERVLEALTTEKCQERFSL
ERLEVLGDAFLKFAVARHLFLLHDTLDEGELTRRRSDIVNNTNLFKLAIRSNLQVYIRDQ
SFEPSQFFALGRTCPLICNKETEGTIHSQCLNDDANHEDACEVRCSKGHHWLHKKTIADV
VEALVGAFIVDSGFKAAIAFLCWIGIQVEFEASQLTNVCMASTKYIPLAACIDVAALEKS
LDYQFLYKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLT
DLRSLSVNNKAFANVAVNRSFQKYIICDSNSLSEAIKVYVDFIETPASERDLLDEPKCPK
ALGDLVESCMGAILLDTGFNLKCVWKIMLSFLDPIMSFSSLQLCPIRELQELCQSYSWDL
QFFPSKKGRNYSVEVKVNSSNFSASASATNLNKKDATRNAAQQIFPKLKAEGCTFRIKSL
EKVLESSCKLEAKLIGYDEMPIDLVPSNATGSEIPNVKESFGCSFDPKVHPASHVVSSLS
SKSIRRLCPSTLGSERTHRDETIQNHASDTDSVTSGGSRKDAATAKSRLYEVCTANCWKP
PSFECCKEEGPSHLKLFTFKVVVEIEEHPDMVLECFGSPHVKKKAAAEHAAEGALWFLTK
EGYTCMSG
NT seq 4887 nt   +upstreamnt  +downstreamnt
atgggtctcacttctgtggtcggtgatgatgaggaatcgagttccagagttcagaatccg
gagaaagaccctaggaaaattgctaggaagtaccagcttgatctttgcaagaaagctatg
gaggagaacataatcgtgtatttggggaccggttgtgggaagacccacatagctgtactg
cttatatacgagctaggccacttgatccgtagaccccagaagagtgtatgtgtttttctt
gcgcccaccgtggatctggctcagcagcaagccagggttatagaagattccattgatttc
aaggtaggagtctacagtgggagctttaagggattgaagagccatgaggattgggaaaag
cagatgaaacaatatgaggttcttgtaatgaccccacaaatactattgcggaacttatct
cattgtttcatcaagatggaatttattgcattactaatatttgatgagtgtcatcatgct
caagtaaacagcaatcacccatatgctgaaatcatgagagagttctacaaaagtaatgcc
acaaatctacctcgtatatttggcatgacagcatctccagttgtaggtaaaggtgcttgt
agtgaagggaatttaccaaaaagcatcaatagtcttgagaaattacttgatgctaaggta
tattcagtagaagataaggaagaattggatagtgttgtggcatctcctttggtaagagta
tatcattatggttcagttgaaaatggtgcttccagtccttatctgccttattgcagtaat
cttgatgagattagacgccagtgcatatcaacacttagtaggaagacggatgactaccaa
agtctgcgcagcacgaagaaaatgctgaacagattgcatgataatttacttttttgcttg
gaaagtcttggcctttggggagcgctacaagctagtcgcattcttttgagtggtgattac
tatgaacggaatgaacttgtagagggagaggggagctacagtgatgattctttatgtgat
agatatctagcacaagctgctgacatgttttcttctgcctgtaagggagatggcattgag
tttgatctatctcatttagagattttcaaagagccatttttctcaagaaagctcgtgcgc
cttattggaattctttcaaccttcaggttacaaccaaatatgaaatgtataatttttgtt
aacaggattgttactgcgagatccctctcatacatactacaaaaccttaagattctagaa
tcttggaagtgcagttttcttgtaggtgtccactctggattgaagaatatgtcgaggaag
accatgaacatcattcttgagaagttccgttctggagagttgaatctattgattgctact
aaggtaggtgaagaaggacttgatattcagacatgctgcctggtgattcggtatgatctt
ccagaaactgttgctagctttatacaatcaagaggtcgtgcgcgaatgcgtgagtctgaa
tatgtacttctggtggacagtggcaatgagaaagaggtaaatttgatagaaaattttaaa
aaagatgaagacagaatcaacttggaaattacttccagaacatccagtgagacgtttatt
ggtttggaggaaagcacatataaagttgattcatctggtgcttcgatcagttctggatac
agtatatcattactccaccagtattgttcaaaactgcctcatgatgagttttttgacccc
aggccaaaattcttttatcttgatgatatagagggaactgtttgtcatgcaattttacct
tccaattcaccattgcatcaaattatcagttcaccacgatcttcgatggatgctgctaag
aaagatgcttgtctcaaagcaattgaagagttgcataaactgggtgccttaaatgactat
ctcttgccagggaaagagaatgcaactctagaggaacctgtacttaacccatctgtttct
gacagccgcaaagatgagggttcacgaggagaactgcatgagatgctagttcctgctaca
ctaaaatatccaaggaataggggggatattcctgtttatctcaattcttactatataaaa
tttagtcctgaacctaatgataggacctataaaagttttggactatttgtcaaggaacct
cttcctgcagaagctgagaaaatggaacttgatcttcatctggctcgtggtagatctgta
atgacaaagtttgttccatcaggggttgcagaatttgataaagatgagattatgctcgca
cagaattttcaagaaatgttcctgaaagtcatccttgaccggaatgaatttgtttctgaa
tttgttgaattgggaaataatgattctcgtaaagcaagctcattgaccttctacctgttg
cttcctgtaacttttgatgacaatgaaaatacaatgagtatagattggaatgttatcaga
agatgtctctcatctccagttttcaggactccagtagatgctttggatgaaaatattctt
ccttcagatattcagttagaacttgccaatggttgcaaaagtagaagggatatcgagaat
agtttagtttatgctcctcataagaacctctttttcttcattactaatgttgtttttgac
aagaatgggtatagtccatacaaagattcgggcactttaagctatgcagagcacttaaat
aaaaagtttggcattcagctaggaaaccccagacaaccgcttctacatgctaaaccactt
ttctgtttgcacaacttgctccacaatcgaaggcaagggcattcaggaccaagtaaacta
gatgagtactttatatgtttgcctcctgagatttgtcacttgaagatactaggcttttca
aaagatattgggagttcaatatctctgttaccatcaattatgcatcgtgtggaaaacttg
ctcgtggccattgaacttaagaacgtattttctgcatcgttcccagagggatctgaagtt
actgctgaaagagttctagaggcactcaccactgagaaatgccaggagcgtttttctctt
gaaaggcttgaagtactcggtgatgctttcctcaaatttgctgttgcaagacaccttttt
cttttgcatgatactcttgatgaaggtgaactaacaaggaggcgttctgatatagtaaac
aataccaatttattcaagctagcaataaggagcaacttacaggtatacatacgtgatcag
tcattcgagcccagtcaattctttgctttgggtcgcacatgcccattaatttgcaataaa
gaaacagaaggaaccattcattcacaatgtttgaatgatgacgcaaatcatgaagatgct
tgtgaagtcaggtgtagcaaaggtcaccattggttacataagaaaacaattgctgatgtt
gttgaagctcttgttggagcattcattgttgacagtggctttaaagctgctattgcattt
ctttgttggattggcatacaagtggaatttgaagcttcacagcttactaatgtttgcatg
gcaagcactaaatacatccctcttgctgcttgtattgacgttgctgcccttgaaaagtca
ctcgattatcagtttctttataagggtctgcttctacaggcatttgtacatccttcttac
aacaagcatggaggaggctgctatcagaggttggagtttctgggagatgctgtcttggat
tacttaatcacctcctacctgtattcggtttatccaaatttgaagcctggtcagttgaca
gatttgagatcactttctgtgaataataaagcctttgcaaatgttgcagtgaatcgttcc
tttcaaaaatatattatttgtgattcaaatagcttatctgaggccataaaagtttatgtt
gacttcattgaaacacctgcatcagaaagggatttgcttgatgagccaaaatgtcctaag
gctttgggtgacttggtagagtcatgtatgggtgccattctgcttgatacggggttcaat
ttgaaatgtgtttggaagataatgctatcctttttggatccaattatgagcttttcgagc
ttgcagctttgtccaattagggaactacaagaactttgtcaatcttattcttgggatctt
caatttttcccatcaaagaagggtagaaactattcagtagaagtaaaagtgaacagcagt
aattttagtgcgagtgcttctgcaaccaatttgaataaaaaggatgctactagaaatgct
gcccaacaaatttttccaaagttgaaggctgaaggctgtacattcaggattaaatctttg
gagaaagtcttagagtcaagctgcaagttggaggccaagctgattggatatgatgaaatg
ccaatagatttagttccttccaatgccactggatctgaaattccaaatgtaaaagaatct
tttggctgcagttttgatcccaaagtccatcctgccagtcatgtagtcagttccttatcc
tcaaaatctataagaagactctgcccttccacattaggctcagaaagaacgcatcgtgac
gagaccattcaaaatcatgcctctgacactgactcggtgacttcaggtgggtcgcgcaaa
gatgcagcaacagcaaaatcacgtttatatgaggtttgcactgcgaactgttggaaaccc
ccttcttttgaatgctgcaaagaggagggaccaagccatttgaagttgttcactttcaag
gttgtagtggagattgaagaacatcctgacatggttttggagtgctttggttcgccacat
gtgaagaagaaggcagcagcagagcatgctgcagaaggggcactttggttcttgacaaaa
gaaggatatacctgcatgtccggctaa

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