Ziziphus jujuba (Chinese jujube): 107427343
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Entry
107427343 CDS
T04794
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03082
ATP-dependent chromatin remodeling
zju03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107427343
03083 Polycomb repressive complex
107427343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zju03036
]
107427343
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107427343
Histone modification proteins
HAT complexes
HATB complex
107427343
HDAC complexes
Sin3A-HDAC complex
107427343
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107427343
PRC2.2
107427343
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107427343
Heterochromatin formation proteins
Other heterochromatin formation proteins
107427343
Chromatin remodeling factors
NuRD complex
107427343
NuRF complex
107427343
NuRF complex (fruit fly)
107427343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD_LRWD1
Beta-prop_EML
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
MIOS_WD40
eIF2A
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
107427343
NCBI-ProteinID:
XP_048317694
LinkDB
All DBs
Position
9:join(22673253..22673564,22673764..22674087,22674167..22674310,22674931..22675055,22675916..22676011,22676598..22676823)
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AA seq
408 aa
AA seq
DB search
MAEEEAGVDQVEEEYTVWKKNTPFLYDFIISHPLEWPSLTVHWVPISPQPHHTHHPSLAV
HKLIFGTHTANGFPNFLMVADALLPTKQVETKLDSDGSNPILPKIEITQKIRVDGEVNKA
RCMPQKPSVIGAKTSASEVLVFDCAKQGVKPQGGECDPDLRLRGHDKEGYGLSWSHLKEG
YLLSGSHDCKICLWDVSALARDKVLDAMHVYEGHKDVVGDVSWHSKNENLFGSVGDDCHL
MIWDLRTNQIEHSVKVHQKEVNYLSFNPYNEWILATASSDTTVGLFDIRNLTEPLHLLSS
HSEEVFQVEWDPNHETVLASSADDRRLNVWDLNRIGDEQLEGDGDDGPPELLFSHGGHKA
KISDFSWNKYEPWVISSVAEDNSLQVWQVADSIIHDDEDDDDVQAADD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggaagcgggtgtcgatcaggtggaggaggagtacaccgtctggaagaag
aacacaccgttcctgtacgacttcatcatctcccatcctctcgaatggccatctctcacc
gtccattgggtacccatttcgcctcagccccaccacacccaccacccatctctcgccgtc
cacaagctcatcttcggtacccacactgctaatggtttccccaacttcctcatggtcgcc
gacgctctcctacccaccaaacaagtcgaaaccaaacttgacagcgatggctctaaccct
attctacctaagatagaaataactcaaaagatacgtgttgatggggaagtgaacaaggca
cggtgtatgccgcagaagccatctgttattggtgctaagactagtgcttctgaagtgctt
gtgtttgattgtgccaaacagggggtgaaaccccaaggtggtgagtgtgatcctgatttg
aggctaaggggtcacgataaagaagggtatgggttgtcctggagtcatttgaaggaaggt
taccttttgagtggttcacatgattgtaaaatatgcttgtgggatgtgtctgctctggct
cgtgataaagtgctcgatgcaatgcatgtttatgagggtcataaagatgtggttggagat
gtatcgtggcattcgaagaatgagaatttgtttggttctgttggagatgattgtcatttg
atgatatgggatttgcgcactaaccaaatcgaacattctgtcaaagttcaccagaaagag
gtgaactatctttctttcaatccatataatgagtggattctggctacagcgtcttcagac
actactgttggtttgttcgacataaggaatctgacagagccattgcatcttttgagtagt
cattcagaggaggtatttcaggttgagtgggatcctaatcatgaaacagtgttggcgtct
tctgctgatgacagaaggttgaatgtttgggaccttaacaggattggagacgagcagtta
gagggagatggtgatgatgggccccccgaacttctgttttctcatggaggtcataaagct
aagatatctgatttctcatggaataaatatgaaccatgggtcatttcaagtgtagctgaa
gacaatagtcttcaagtttggcaagtcgctgacagtattatccatgatgatgaagatgac
gatgatgttcaagctgctgatgattaa
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integrated database retrieval system
