KEGG   Ziziphus jujuba (Chinese jujube): 107427607
Entry
107427607         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107427607
  KO
K12828  splicing factor 3B subunit 1
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107427607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107427607
   03036 Chromosome and associated proteins [BR:zju03036]
    107427607
Spliceosome [BR:zju03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107427607
 Complex B
    107427607
 Complex C
   U2 SnRNP specific factors
    107427607
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107427607
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME MMS22L_C
Other DBs
NCBI-GeneID: 107427607
NCBI-ProteinID: XP_048336064
LinkDB
Position
9:25765200..25769024
AA seq 1274 aa
MEDDQNNIAKTQEERRRMEQQLAALNSVAYDTDLYGDTNREAYVSSIPATDDDENLDAVE
NDIARKMASYTAPKSLLKDAPRGGDADEDVGFNRPKKIIDREDEYRRRRLQRVFSPERID
PFAMGEKTPDPSMRTYADVMKEESLRREKEETLKLIAQKKKEEEEAAKAGKVDSGGAAVA
PVATQKRRNRWDQSQDDGVEAAAAKKAKTSDWDLPDSGGPGRWDATPTPGRVAADATPSL
ARRNRWDETPTPGRVADSDATPAGAVTPGATPAGMTWDATPKLAGLATPTPKKQRSRWDE
TPATMGSATPMAGATPAAAYTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLLRWEKDI
EERNRPLTDEELDAMFPQEGYKILEPPPTYVPIRTPARKLLATPTPMGTPLYSIPEENRG
QQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQ
RKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYV
HKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARA
FSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIE
HGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIG
FIIPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVESDYIRNDIL
PEFFRNFWVRRMALDRRNYKQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMET
IEKVVANLGASDIDSRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLP
QICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVL
GSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFV
PAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRV
CTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVT
PLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAV
MEAIEGMRVALGAAIVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPSLEDE
HNNVYSRPELLMFV
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggaagacgatcaaaacaacatagcgaagacgcaagaggaacggaggcgtatggagcag
cagttggctgcgctcaactccgtcgcgtacgacacggatctatacggcgacacgaacagg
gaagcctacgtctcgtctattccggccaccgacgacgatgagaacctcgacgccgtggag
aacgacatcgcgcgcaagatggcttcttataccgcccccaaatcgctcttgaaggatgct
cctagagggggcgacgccgatgaagatgtggggtttaataggccaaaaaagattatcgat
cgcgaggatgagtatcggagacggaggctgcaacgcgtgttttctccggagagaatcgat
ccatttgcaatgggggagaagaccccggacccgtctatgaggacctatgcggatgtgatg
aaggaggagtcgttgaggagggaaaaggaggagactctgaaacttattgcgcagaagaag
aaggaagaagaggaggctgccaaggccgggaaagtagattccggtggtgctgctgttgct
cctgttgccacgcagaagaggaggaataggtgggaccaatctcaggacgatggagtggag
gccgcggcggcgaagaaggccaagacttctgattgggatttgcccgatagtggtggccct
ggaaggtgggatgctacccctacacctggtagagtcgctgctgatgcaaccccatcactt
gcaaggaggaacagatgggatgagactcccactcccggacgcgttgcagattccgatgct
acgccggctggggctgttacacctggtgctactcctgctgggatgacctgggatgctact
ccgaagctcgctgggcttgccactccaactccgaaaaagcagaggtctcggtgggatgag
actccagcgactatgggcagtgcaactccgatggctggagctacacctgctgcggcttat
acacctggagtgacccctgtaggaggagttgagcttgctacaccaacgccaggggctata
aatctgcgcggcccaatgactccggagcagtataatttgttgaggtgggagaaagatatt
gaggagagaaaccgtcccttgactgatgaagagcttgatgcaatgtttcctcaagagggg
tataagatcttggagcctccgcctacatatgtgcctattagaacaccagctaggaaactg
ctagcaacccctactcctatggggactcctctctattcgatacctgaagagaatcgtggg
cagcagtttgatgttccaaaagaagcacctggtggcttgcctttcatgaagccagaggat
taccagtattttggagcgttgttgaatgaagaggacgaggaggaattgtctcctgaagaa
cagaaagagcgtaagattatgaagcttttgcttaaggtcaagaatggtacacctccacag
aggaagacagcgttgagacagcttactgataaagctcgagagtttggtgctggtccactg
tttaaccgtattctgccattgcttatgcaacccactttggaagaccaagagaggcatctt
ttggttaaggttattgatagggtgctttataaattggatgaattggtgcgtccttatgtg
cacaagatacttgtggtgatagagccgttgttgattgatgaagactactatgctcgagtg
gaaggtagagagatcatttcgaatcttagcaaagcagctggtttggctactatgattgca
gcaatgcgtcccgatattgacaacattgatgaatacgttaggaacactactgcaagagct
ttcagtgttgttgcttctgctcttggtattcctgcactgttgccattcttgaaagctgtt
tgtcagagtaagaagtcatggcaagcacggcacactggaatcaagatagttcagcagatt
gccattttaataggctgtgctgttctgccccacttaaggtctcttgtggaaatcatagag
catggactgaatgatgagaatcagaaggtgcgaacaattactgcattgtctcttgctgcg
cttgctgaggctgctgctccatatggtattgaaagctttgactcggttctgaagccattg
tggaagggtattaggtcacaccgtgggaaggtcttggctgcattcttgaaagccattggt
tttattattcctcttatggatgctatatatgctagttattacaccaaggaagtcatggtt
atattaattcgagagttccagtcacctgatgaagaaatgaagaaaattgtgttgaaagtg
gtgaaacagtgtgtgagtaccgagggtgtagagtctgactatattagaaatgatattctt
cctgagttcttcagaaacttttgggttagaaggatggcattagatagaagaaactataag
caactagtagagacaactgtggagatggcaaacaaagtaggtgttgctgatattgttgga
agaattgttgaggatctcaaagacgagagtgaaccatataggcgaatggtaatggaaacc
attgaaaaggtggtagcaaatctgggtgcatcagatattgattctcgcttggaggaactt
ctgattgatggtattctttatgctttccaagagcagaccagtgacgatgccaatgtcatg
cttaatgggtttggagcggttgtgaattctcttgggcagagagtgaaaccatacttacct
cagatatgtggtaccatcaagtggcgcttgaataacaagagtgctaaggtgaggcaacaa
gcagctgatctaatttcaagaattgctgttgtcatgaaacagtgccaagaggaacaactg
atgggtcatcttggtgttgtcttgtatgagtatctgggagaagaatacccagaagttttg
ggatcaattctgggtgcactcaaggcaattgtcaacgtcattggtatgacaaagatgaca
cctcctataaaggatttgcttcccagacttactcccattttgaaaaataggcatgaaaaa
gtacaggagaactgtattgatcttgtaggtagaattgcagatcgtggtgccgagtttgtt
ccagcgagggagtggatgaggatctgttttgaacttcttgagatgctcaaggcccataag
aagggcatcaggcgagctactgtaaacacgtttggttatattgccaaagccattgggcca
caagatgtccttgcaaccttgttgaacaatctgaaggtgcaggaaagacagaaccgtgtt
tgcacaactgtggcaattgcaatagtagctgaaacctgttcacctttcacggttttgcca
gctctgatgaacgaatatagagttccagagctgaatgtgcagaatggtgtgctgaaatct
ctctcttttctgttcgagtacattggagaaatgggaaaagattacatttatgcagtcacg
ccgttgctagaggatgctttgatggatagagatctagttcacaggcaaacagcagcttct
gctgtcaagcacatggcattgggggtggctggattgggttgtgaggatgcattagtccac
ttgctgaattatgtatggccaaacatatttgagacttccccacatgtcataaatgctgtc
atggaagccattgaagggatgagagtggctttgggtgctgctattgttctaaactactgc
ctccaggggctgttccatccagcccggaaagttcgagaagtgtactggaagatctataac
tcgctgtatatcggagctcaagatgcgcttgtagcagcttatccatcgctggaggatgag
cacaacaacgtatacagtaggcccgagctgttgatgttcgtctga

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