Ziziphus jujuba (Chinese jujube): 107427983
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Entry
107427983 CDS
T04794
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107427983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107427983
03036 Chromosome and associated proteins [BR:
zju03036
]
107427983
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107427983
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
107427983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
107427983
NCBI-ProteinID:
XP_015893885
UniProt:
A0A6P4AEW4
LinkDB
All DBs
Position
9:complement(join(30296234..30296317,30296489..30297517))
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AA seq
370 aa
AA seq
DB search
MGASSDPNQEGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEI
VQLDDSNGEIRSDPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDYLRVWRISDDSVEI
KSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVY
DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII
MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ
PVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILREILLAIGTIYHSIMHFV
IPFLMPGFAC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgagcagcgatccgaaccaggaagggtcggacgagcagcagaaacgttcggag
atctacacgtacgaagccccgtggcacatctacgcgatgaactggagtgtccggcgagac
aagaagtaccgcctggccatcgccagcctcctggagcagtacccgaaccgagtggaaatc
gtgcagctggacgactccaacggcgagattcggtcggacccaaacctgtccttcgagcat
ccctatccccccaccaaaaccatcttcatcccggacaaggagtgccagaagcccgacctc
ctcgccacctccagcgactacctccgcgtctggcgcatctccgacgactccgtggagatc
aagagcctcctcaacggcaacaaaaacagcgagttctgtgggcccctcacatccttcgac
tggaacgaggctgagcccaagcgcatcggcacctccagcatcgacaccacctgcaccatc
tgggacatcgaacgcgaggcggtcgacacccagctcatcgcccacgacaaggaggtttac
gacatcgcctggggcggcgttggcgttttcgcctccgtctccgctgatggctctgttagg
gttttcgacctccgcgataaggagcactccaccatcatctacgagagctccgagcccgac
acccccttggtccgcctcggctggaacaaacaggaccctaggtacatggccaccatcatc
atggacagtgctaaggtcgttgtgcttgacattcgcttcccgactctccctgtcgtcgag
ttgcagaggcaccaggccagcgtcaatgccattgcttgggcccctcatagctcttgccac
atctgcaccgccggcgatgactctcaggccctcatctgggatctttcctccatgggacag
cccgtcgagggtggcctcgaccccatccttgcttacactgctggggcagagattgagcag
cttcagtggtcctcttctcagcctgattgggttgccattgccttctccactaagcttcag
atactcagggaaatcctcctcgcaattggaacaatctaccactctattatgcattttgtc
atcccattcctaatgcctggttttgcgtgctaa
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