Ziziphus jujuba (Chinese jujube): 107428281
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Entry
107428281 CDS
T04794
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X2
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zju03036
]
107428281
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107428281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
SWI2_SNF2
Protamine-3
Motif
Other DBs
NCBI-GeneID:
107428281
NCBI-ProteinID:
XP_015894276
UniProt:
A0A6P4B6K3
LinkDB
All DBs
Position
12:complement(join(3460654..3460663,3460836..3460972,3461092..3461169,3461441..3461599,3461714..3461887,3462018..3462203,3462882..3463062,3463143..3463393,3463495..3463535,3464291..3464408,3465378..3465914))
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AA seq
623 aa
AA seq
DB search
MKRVFEEISDDEWENHSFKPSRILNNKSSQNPSLPQPPPIESFAFRSSSSSARIEISDQS
SDDCVEIKEDLEDDDANVELVRPPANRGRRFVIDDDESEGEFDEVVALKSTTEDEEEEEE
EEEEEDEEEEVDEEDVVGKALQKCAKISAELKKELYGSGVSACDRYAEVENSSVRIVTQD
DINAACRSEDSDFQPILKPYQLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAITYLTLL
KHLNNNPGPHLIVCPASVLENWERELKKWCPSFSVLQYHGAARSAYSKELSSLAKAGLPP
PFNVLLVCYSLFERHSAQQKDDRKILKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAQNA
NQRLMLTGTPLQNDLHELWSLLEFMMPDLFCTEDVDLKKLLNAEDRELIGRMKSILGPFI
LRRLKSDVMQQLVPKIQQVEYVVMEKQQDDTYRESIEEYRAASRARMAKSSDVNSNNIFK
VLPRRQISNYFVQFRKIANHPLLVRRIYSDEDVVRFAKKLYPMGVFGFECTLDKVIEELK
SYNDFSIHRVLLYYNVSDAKGSLSDKYVMLSAKCQALAELLPSLKQDGHRVLIFSQWTSM
LDILEWTLDVIGVTYRRLDGRRL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgtcttcgaagaaatctccgacgacgagtgggaaaaccactcctttaagccc
tctcgaattctcaacaacaagtcctcccaaaaccctagccttcctcaacctcctcctatc
gagtcctttgctttccggtcgtcgtcgtcgtcggcgaggattgaaatctccgatcaaagt
agcgacgattgcgtcgagattaaggaggatttggaggacgacgatgccaacgtcgagctg
gttaggcctccggcaaatcgtggccgtcggttcgtgatcgatgatgatgagagtgaggga
gagttcgatgaagtggtggcgttgaagtccacgactgaggatgaggaagaagaagaagaa
gaagaagaagaagaagatgaagaagaagaggtggatgaggaagatgttgtagggaaggct
ttacagaagtgcgcgaagatttcggccgagctgaaaaaggagctatatggttctggagtg
tcggcttgtgatcgttatgcggaagtagaaaattcttctgtgaggattgtcactcaggat
gatattaatgcggcatgtagatcagaggattcagattttcagcctattctcaagccatac
cagttggttggtgtgaactttcttcttctattgtatcggaagggtattggaggagccata
ttggccgatgagatgggccttgggaagactattcaggctataacttatctgaccttattg
aagcatttaaacaataatcctggtccgcatttgattgtatgtcctgcttctgttttggaa
aactgggaaagagaacttaaaaagtggtgtccatcattttctgttctccaatatcatggg
gctgcacgatcagcttattcaaaagagttgagctcattggccaaagctgggttgccacct
ccatttaatgttcttcttgtttgctattcactttttgaaagacacagtgcacagcagaaa
gatgaccgcaaaattcttaaacgttggcgatggagctgtgtgcttatggatgaagcccat
gccttgaaggataaaaacagttatagatggaaaaacctaatgtcagttgcacaaaatgcg
aaccagcgtctaatgctgacagggacaccattgcaaaatgatttacatgagctatggtcg
ctgttggagtttatgatgcctgatcttttttgtactgaggatgttgacttaaaaaagtta
ctaaatgctgaagatagagagttgattggccgtatgaaatccattttgggaccatttatt
ttgagacgtttaaaatctgatgtaatgcagcaacttgttccaaaaatacagcaggttgag
tatgttgtaatggaaaagcaacaagatgacacctatagagaatctattgaggagtatcgt
gcagcttcacgagctcgtatggcaaaaagttcagatgttaactctaataatatatttaaa
gttcttcctcggcggcagatttccaattactttgttcagtttcgtaagattgcaaatcat
cctttattggtgaggcgtatttacagtgatgaggatgttgttcggtttgctaaaaagtta
tatccaatgggtgtctttggctttgaatgtacattagataaagtgattgaggagcttaag
agttataatgacttttctatccaccgggttttgctttactataatgtcagtgatgcgaag
ggatccctctcagacaaatatgttatgctttcagcaaaatgtcaggcattagctgaactt
ctcccttcacttaaacaagatggacatagggttctgattttcagtcaatggacatcaatg
cttgatatcttggagtggactttggatgtgattggggttacatatagacgtcttgatgga
aggagattgtaa
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