Ziziphus jujuba (Chinese jujube): 107428552
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Entry
107428552 CDS
T04794
Name
(RefSeq) polyadenylate-binding protein 6 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03015
mRNA surveillance pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107428552
09123 Folding, sorting and degradation
03018 RNA degradation
107428552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107428552
03041 Spliceosome [BR:
zju03041
]
107428552
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107428552
mRNA cycle factors
Stress granule specific factors
107428552
Spliceosome [BR:
zju03041
]
Complex C
Other components
Complex C specific factors
107428552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
107428552
NCBI-ProteinID:
XP_060671627
UniProt:
A0ABM4A4H4
LinkDB
All DBs
Position
1:join(44612218..44612449,44613122..44613431,44614164..44614237,44614318..44614460,44614631..44614687,44614803..44614874)
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AA seq
295 aa
AA seq
DB search
MFGVPVPMTTPNPKPAPEADNGIWSLYVGDLDPKVTEADLIDKFRLIGPIASARLCCDSF
TGDSLHYAYVNFFTLLDASTALCFLNHKELKGKPIRIMWSQRYPLTRKTGIANLFVKNLH
LSFTSAQLQTMFSMFGKILSCKVAAENGKTKGFGFVQYDSEQSAMAARNALHGTLVKGKK
IYVSKFVKKSARTVTRGEAMKASLQGQNKNLFIARAEQKEIANCHMEKLKAESLPLKNST
HPVHYSSFQSLGKDLIKQRQHGNIGNQSFVGNPLRAAKMKTTLSKSHNSSTVSKC
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgttccggttccaatgacaacaccaaatccaaagccagcaccggaggcggat
aatgggatatggtcgctgtacgtgggagacctggacccaaaagtcacggaagcagacctc
attgataagtttcgtttaataggtcccattgcctctgcgcgtctctgctgtgattctttc
accggcgactcccttcactacgcctacgtcaacttcttcacgttattagacgcgtccacg
gctttatgttttctcaaccacaaggagctcaagggaaaacccataagaatcatgtggtcg
cagagataccctttgacaagaaaaacgggtattgcaaatctttttgttaaaaaccttcac
ctgtccttcaccagtgctcaattgcagactatgttctccatgtttgggaagatattatct
tgcaaggtcgctgcagagaacgggaagacgaagggttttggtttcgtgcaatatgattct
gaacaatctgctatggctgctcgtaatgctctacatggtacactggttaaggggaagaaa
atatatgtatcaaaattcgtaaaaaagagcgcaagaacagtaacccgtggagaagctatg
aaggcttcactgcaagggcaaaacaaaaatttatttatagcaagggctgagcagaaggag
attgccaattgccacatggaaaagctgaaggctgaaagtctaccactaaagaactcaacc
catcccgtccactactcttctttccaatcattgggaaaggatctaatcaaacagagacag
catggtaatattggtaatcagagttttgtagggaatcctctgcgtgctgcaaagatgaaa
acaactctgtcaaagtcacataattcctcgactgtaagcaaatgctag
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