KEGG   Ziziphus jujuba (Chinese jujube): 107428559
Entry
107428559         CDS       T04794                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107428559
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107428559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107428559
   04131 Membrane trafficking [BR:zju04131]
    107428559
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107428559
Membrane trafficking [BR:zju04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    107428559
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107428559
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    107428559
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR19_1st WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st EIF3I Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IFT140_1st WD40_2 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd DUF4987 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 107428559
NCBI-ProteinID: XP_015894594
UniProt: A0A6P4AZ06
LinkDB
Position
1:44654932..44655837
AA seq 301 aa
MPAQKIETGHQDTVHDVVMDYYGKRIATASSDHTIKITGVSSSASQNLATLSGHQGPVWQ
VAWAHPKFGSLLASCSYDGRIIIWKESNQNEWTQAHVFTDNKSSVNSIAWAPHELGLILA
CGSSDGNISVYTAIADGGWSSTRIDHAHPVGVTSVSWAPSTAPSALVGPGLLDPVQKLCS
GGCDNTVKVWKLYNGIWKLDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
IVAKEGDQWEGKVLNDFRTPVWKVSWSLTGNILAVADGNNNVTLWTEAVDGEWQQVQTVD
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccggcccaaaagattgagactggtcaccaagacacagtgcatgatgtggttatggat
tattatgggaagcgcattgccacagcttcatctgaccacactataaagataactggtgta
agcagttcggcctcccagaatcttgcaacactgagtggtcaccaaggacctgtgtggcag
gtagcttgggctcacccaaaatttgggtctttgcttgcttcatgttcttatgatggaaga
atcataatatggaaagaaagcaatcagaacgagtggacccaagcccatgttttcactgac
aacaaatcatccgtgaattcaattgcttgggctcctcatgaactaggtcttattttggca
tgcggttcgtctgatgggaatatctcagtttacactgccattgctgacggaggttggtcg
tctacgaggattgaccatgcgcatccggttggagttacttctgtttcatgggctccctct
acggcaccctctgctcttgttggtcctggcttgctggaccctgttcagaagctttgctct
ggtggttgtgataatactgtaaaggtttggaagctttataatgggatttggaagctggat
tgctttcctgctcttcaaatgcatactgattgggtcagggatgttgcttgggcacccaac
ttgggactaccaaaatctaccattgcaagcgcctcacaggatggaaaagttattatatgg
attgtggccaaggaaggggatcagtgggaaggtaaggttttgaatgatttcaggacgccc
gtttggaaggtctcgtggtcactgactggaaacatattggctgtcgcggatgggaacaac
aatgtgaccttgtggacagaagcagtagacggcgagtggcaacaggtgcaaacggttgat
ccatag

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