Ziziphus jujuba (Chinese jujube): 107428623
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Entry
107428623 CDS
T04794
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107428623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107428623
Spliceosome [BR:
zju03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107428623
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
107428623
NCBI-ProteinID:
XP_015894677
UniProt:
A0A6P4AGH9
LinkDB
All DBs
Position
12:complement(join(6471766..6471873,6472323..6472398,6472669..6472771,6473221..6473291,6473388..6474292,6474634..6474771,6474874..6474939,6475656..6475658))
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AA seq
489 aa
AA seq
DB search
MATLADSFLADLDELSDNDADIIDEDDGEAANMEEDVDGDLADIENLNYDDLDSVSKLQN
TQRYAEIMQKVEDALQKDSDASNQGVDQGIVLEDDPEYQLIVECNSLSVDIENEIVIIHN
FIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTT
SGKPLPDEILQKTVDACDRALSLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGT
AGGLAALAKMPACNVQLLGAKKKNLAGFSTATSQFRLGYIEQTEIFQSTPPPLRMRACRL
LAAKSTLAARVDSTRGDPSGGTGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKR
GGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQS
KLAAKFGKKFKEKQYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSET
GTFSKIKRT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaactttggctgattctttccttgctgacctagatgagctatctgacaatgatgcc
gatattattgatgaagatgatggagaggccgcaaacatggaggaagatgttgatggggac
ttggcagacatagaaaatctaaattatgatgatctggatagcgtttcgaaattgcagaat
acacagagatatgctgaaataatgcagaaagtggaagatgcacttcagaaagattctgat
gcctcaaatcagggagtagatcaggggatagtcctggaagatgatcctgaataccagctg
attgtggaatgcaactccttgtcggttgacattgaaaacgaaattgttattatccacaat
tttattcgtgacaagtaccgtttgaaatttccagagcttgaatcacttgtgcatcaccca
attgattatgctcgagttgttaagaagattggaaatgagatggatgtaacccttgttgat
ttagagggtcttctaccttccgcaattattatggtagtgtcagttacagcatcaactact
agtggcaagccactaccagatgaaattcttcagaaaacagttgatgcttgtgaccgagcc
ctttctcttgattcagcaaagaaaaaggttcttgattttgtggaaagtagaatgggatat
atcgcaccaaacctttctgcgatcgttgggagtgctgttgctgcaaaacttatgggcact
gctggtggtcttgctgcattggctaagatgcctgcttgtaatgtgcagcttcttggtgcc
aagaaaaaaaaccttgctgggttttctactgcaacatcgcaattccgtctaggttacatc
gagcagacagaaatatttcaaagtacacctcctcctttgaggatgcgtgcttgcagactc
ttggctgcaaagtcaacacttgctgcacgagtagattccacaagaggagatccatctgga
ggcactggaagggctttccgagaagagatccgaaagaaaattgagaagtggcaagagcct
cctcctgctaagcaacctaaaccacttccagttcctgattctgagcccaaaaagaagaga
ggtggtcgtcggcttaggaaaatgaaggaaaggtacgcaataacagacatgcggaagctg
gctaataggatgcaatttggtgtgcctgaagagagttctttaggggacggactgggggaa
ggttatggaatgcttggtcaggctgggagtggcaagttgcgtgtatcaatgggtcagagt
aaacttgctgcaaaatttggcaaaaagttcaaggaaaagcaatatggaagcagtggtgct
acatctggattgacttcaagtttagcatttacacctgtgcaggggattgagctcacgaat
ccacaggctcatgcacaccagcttggtagtggaacgcagagcacctacttttctgaaacg
ggaactttttcaaagatcaagaggacctga
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