Ziziphus jujuba (Chinese jujube): 107428696
Help
Entry
107428696 CDS
T04794
Name
(RefSeq) RING-H2 finger protein ATL43 isoform X2
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107428696
Enzymes [BR:
zju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107428696
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107428696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
PRIMA1
Prok-RING_4
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
107428696
NCBI-ProteinID:
XP_015894853
UniProt:
A0A6P6G6P0
LinkDB
All DBs
Position
1:join(1995825..1997326,1997471..1997501)
Genome browser
AA seq
510 aa
AA seq
DB search
MARHFCSFFFFIFFLLRTSSAHNNTLVLRDTNGASSNGSVISIPSPSSSPPPPPTLPPPP
PPNLVRTKFSPFRPSIAVIVGVLTTMFSVTLLLLLYAKHCKRSDLIAVGYGGHSLNSRVG
GGGGVTPSSSYARKNSGIDRSVIESLPVFRFGSLMGQKDGLECAVCLTRFESSEVLRLLP
KCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEDSKILNQNQNHQLSPPEPPPPPL
EEAEANGTVSDIESQRSAGGEWETANSGYRRVSGRHSSAGEGGTGFLQVLVQKPGGESGH
CDTASFYRRSLDSWSMQKKKRKESVAMGCFDRPRKDGLLLTEEKTRNNSSEERRVEHRII
ISPGCSGFHQRWSDVQPSDLLYLRSEMIISDSRRFSGGSSRASTVTRQQNNMLVALQRNK
KGDLEEEEEGNGTGIGIDGNRWSGSGSGSGRTVINSRSVSEITGLSRFSNRRLSDSNDTQ
HCHHHHHQQLQQQRHARLLSRFHVGFANEE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccatttttgttcctttttcttcttcatcttcttcctcctccgaacttcttca
gcacacaataatacacttgttcttcgtgataccaatggcgcttcctccaatggcagtgtt
atctccatcccttctccttcttcttcaccaccaccaccaccaactcttcctcctcctcct
ccacccaatctcgtcaggactaaattctctccgtttcgacccagtatagccgttatagtg
ggtgttttaacaaccatgttttccgtcactttgcttcttcttctttatgccaaacactgc
aagcgcagtgatcttatcgccgttggctatggcggtcattctttgaactccagagttggt
ggtggtggtggtgtcactccttcttcctcctacgcaaggaagaactccggcattgaccgt
tccgttatcgaatctctgcccgttttcagattcggatcccttatgggtcagaaggatggg
ctcgaatgcgccgtttgcctcaccaggttcgagtcctcggaggtcctccgtttgcttccc
aaatgcaagcacgctttccacgtcgaatgcgtcgatacgtggctcgacgcccattccacc
tgccccctctgtcggtaccgggtcgacccggaagatatcctcctcgtcgaggactccaag
atcttgaaccagaaccagaaccaccaattgtcaccgccggaaccaccaccaccaccattg
gaagaagccgaagcaaacggcaccgtttcggatatagagagccaaaggagcgccggtgga
gagtgggagacggcgaactcgggttaccggagggtttcgggtcggcactcgtcggcgggc
gaaggggggaccgggtttttacaagtgctggtgcagaaaccgggtggggagtcgggtcat
tgtgatacggcgtcgttttataggaggtctctggatagctggagtatgcagaagaagaag
aggaaggagtccgtagccatgggatgttttgacagacccagaaaggacgggctgcttttg
accgaagaaaagacaaggaacaacagctcggaagagaggagggtggagcacagaatcatt
atctcccccgggtgcagtgggttccaccagagatggagcgatgtacagccgtccgatctg
ctatatctacggtcagaaatgataatcagtgacagccgtaggttttcaggaggatcatcg
agggcgtcgacagtgacgcgtcagcagaataatatgctggtggcgttgcagaggaataag
aaaggagatttagaagaagaagaagaaggaaatggcactggcataggcattgatgggaac
aggtggagtggcagtggcagtggcagtggcaggacagtaataaattcgagaagcgtgtcg
gaaatcacgggcttaagcaggttttccaacagacgcttatcagacagtaatgacacccaa
cactgtcatcatcatcatcatcagcaactacaacaacagcgacacgcccgcctcctgtcc
agatttcatgtgggttttgcaaatgaggagtag
DBGET
integrated database retrieval system
