Ziziphus jujuba (Chinese jujube): 107428885
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Entry
107428885 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC107428885
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107428885
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
107428885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
107428885
NCBI-ProteinID:
XP_048318740
UniProt:
A0A6P4AJ63
LinkDB
All DBs
Position
12:complement(join(15369052..15369190,15369409..15369807,15370132..15370263,15370342..15370469))
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AA seq
265 aa
AA seq
DB search
MEVVKCESSFGEDSDDDSHGQYANDDDAEYSYASGLVPKLQSRNIVSKARWNPKMEMAEV
IVQKGSLWKTTGIARSGMIYCSIEEVLFLAELGALILLDHCDATLPLEDIYVKVANGKNG
CSWEQFQAYKQLKSLGYIVGRHGVPWSLKGVNRSNECVSSKCSVESALADSESEDKSSII
GMFNGMQINEARPVFDVYLPNSKFRKSSPGDPSFVLCFTGGYPPSKAELEALERQCGGVP
LKFCHIEHGRVNFFSFDRVELPVLP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgtgaagtgtgaaagttcatttggagaagacagcgatgatgatagccatggg
caatatgccaatgatgatgatgcagaatattcctatgcttctggcttagtgcccaaattg
caatccaggaacattgtgtcaaaggcccgttggaatcctaaaatggaaatggctgaagtc
atagttcaaaagggttcactttggaagacaactggaatagctcgtagtggcatgatctat
tgctcaattgaagaagttttgtttttggctgaattaggggctttaattctattggatcat
tgtgatgccactcttcccttagaagatatttacgtaaaggttgcaaatggaaaaaatggg
tgttcttgggagcaatttcaggcgtataaacaactaaaatctcttggttacattgttgga
cgacatggtgtaccctggtccttgaagggtgtcaacagaagcaatgaatgtgtttcttct
aaatgctctgtagaaagtgcattggcagactcggaatcagaagacaaaagttccattatt
ggaatgttcaatggaatgcagatcaacgaagcaaggccagtttttgatgtttatctaccc
aacagcaagtttagaaagtcttctcctggcgatccaagctttgttctctgctttactggg
ggctatccaccatccaaagcagaacttgaagccctggagagacagtgtgggggagttcct
ttgaagttttgtcacatcgagcatggacgggtcaatttcttttcttttgaccgagtggag
cttcccgttctaccctga
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