KEGG   Ziziphus jujuba (Chinese jujube): 107429149
Entry
107429149         CDS       T04794                                 
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107429149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107429149
   03110 Chaperones and folding catalysts [BR:zju03110]
    107429149
   03029 Mitochondrial biogenesis [BR:zju03029]
    107429149
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107429149
Enzymes [BR:zju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     107429149
Messenger RNA biogenesis [BR:zju03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     107429149
Chaperones and folding catalysts [BR:zju03110]
 Heat shock proteins
  HSP60 / Chaperonin
   107429149
Mitochondrial biogenesis [BR:zju03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    107429149
Exosome [BR:zju04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107429149
  Exosomal proteins of other body fluids (saliva and urine)
   107429149
  Exosomal proteins of breast cancer cells
   107429149
  Exosomal proteins of colorectal cancer cells
   107429149
  Exosomal proteins of bladder cancer cells
   107429149
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 107429149
NCBI-ProteinID: XP_015895290
UniProt: A0A6P4AHT7
LinkDB
Position
12:join(17291531..17291689,17291783..17291908,17292150..17292287,17292576..17292671,17292804..17293046,17293123..17293357,17293753..17293922,17294109..17294186,17294288..17294359,17294441..17294545,17294636..17294728,17294874..17294966,17295505..17295730,17295839..17295861)
AA seq 618 aa
MAFSPTTISAISFTNPTLSKRPYSPSSSSSLNPKAMAKEVYFNHDGSVTKKLQAGVDMVA
ELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPVENVGVKLVRQAGAKTNDL
AGDGSTTSVVLARGLIAEGVKVIAAGMNPVQIARGIEKTADALVSELKMMSREIQDHELA
DVAAISAGNDYTVGNMIADAFNRVGKRGVVTIEKGKSTENSLQIVEGMKFDRGYLSPYFV
TDRQKMLVEYHNCKLLLVDRKIINAKELFKLLDSAVKEKYPIVIVAEDIDKEALAPVIRN
KLKGVLQAAAIKAPAFGERKSQYLDDIAILTGGTVIRDEMGLTLDKVGKEVLGIATKVVI
TKDSTLIVTDGSTQGAVEKRVSQIQRLSENTEENSQKKILNERIARLSGGIAILQVGAQT
QVELKDKQLRIEDALNATKAAIEEGIVVGGGCSLLRLSTKVDDIKEGLDNEEQQIGAEIF
KRALSYPVKLIAKNAGVNGSVVVENILSNHNTEYGYNAARDCYEDLVKAGIMDPSKVVRC
CLEHAASVAKTFLTSNAVVVDIKELEPIRRRMPMPTATPRSMSMPMPMPSSMPMPKPMTR
PMTRSMPRPGSGLGPIGF
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcattctctccaaccacaatttctgcaatttctttcacgaacccgacactctccaaa
aggccttattcaccttcttcttcttcttctctaaacccaaaagccatggccaaagaagtt
tacttcaaccatgacggttcagtcacaaagaagcttcaggcaggggtggacatggtggca
gagcttgttggagtcacattgggtccaaaaggaagaaatgtggttctgcaaaataagtat
ggaccgcctaagattgtaaatgacggcgagactgttctcaaacagattgaattggaggac
cctgtggagaatgttggagttaaattggtaaggcaagctggagctaaaacaaatgatctt
gctggtgatggttctacaacatctgtggttcttgctcgaggtcttattgctgagggtgta
aaggttattgcagctggcatgaaccctgttcaaattgctcgtgggatagagaagacagca
gatgctcttgtttctgaactcaaaatgatgtctagagagattcaggatcatgagcttgca
gatgttgctgcaattagtgcagggaatgattatacagtgggaaatatgattgcagatgct
tttaaccgagtaggaaaaaggggtgttgtcacaattgaaaaaggaaagagtactgagaac
agtctacaaattgtagaagggatgaagtttgatcgtggatacttgtctccatactttgtc
actgatcgacaaaagatgctagtggagtatcataattgcaagttacttttggttgacaga
aaaattataaacgcaaaggagttgtttaaattattggacagtgctgttaaagagaagtat
ccaattgtcatagttgcagaggacattgataaggaagctctggctccagtaattagaaat
aagctcaaaggagtgttgcaggcagctgctattaaggctcccgcctttggagagcgcaag
agccagtacttagatgacattgccatcttaactggaggcactgtaatcagagatgagatg
ggtttgacccttgataaggttggcaaggaagtgttgggcattgccaccaaagttgtgata
actaaagattctacattaattgtgaccgatggcagcactcagggagctgttgagaaaagg
gtttctcaaatccaacggctttctgagaataccgaagagaattcccaaaagaagatactg
aatgaaagaatagcaaggttatcagggggaattgctattcttcaggtaggagcacaaaca
caagtggagttaaaggataaacaactcagaattgaggatgctttaaatgcaaccaaggca
gcaattgaggaaggcattgtagttggtggtggatgtagccttttgagattatcaacaaag
gtggatgatatcaaagaaggtttggataatgaagaacagcagattggagctgagatattc
aagagagctttaagttatcctgtaaaactgatagccaaaaatgcaggtgtaaatggcagt
gttgttgtagagaatattctatccaatcataatacagaatatggatataatgctgcaaga
gactgttatgaggaccttgtgaaagctgggatcatggatccatcaaaggtagttagatgt
tgtttggagcatgcggcatctgtggccaagacttttctgacatctaatgctgttgtagtc
gacataaaagaattagagcccatccgaaggaggatgccaatgccaacagcaacgccaagg
tcaatgtcaatgccaatgccaatgccgagttcaatgcccatgccaaagccaatgacaagg
ccaatgacaaggtctatgccaaggccaggctcaggacttggaccaattggcttctag

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