KEGG   Ziziphus jujuba (Chinese jujube): 107429243
Entry
107429243         CDS       T04794                                 
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X2
  KO
K13148  integrator complex subunit 11 [EC:3.1.27.-]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:zju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107429243
Spliceosome [BR:zju03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Integrator complex
    107429243
SSDB
Motif
Pfam: Beta-Casp Lactamase_B_6 RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_3
Other DBs
NCBI-GeneID: 107429243
NCBI-ProteinID: XP_048318829
LinkDB
Position
12:join(18989458..18989482,18989656..18989839,18990032..18990104,18990285..18990402,18990681..18990754,18990886..18991022,18991139..18991202,18991956..18992021,18992554..18992623,18992953..18993057,18993350..18993491,18994118..18994214,18994312..18995145)
AA seq 662 aa
MAIDCLVLGAGQEVGKSCVVVSINGKRIMFDCGMHMGYLDHRRYPDFSLILGSGGSGFDQ
ALDCIIITHFHLDHVGALPYFTQVCGYGGPIYMTYPTKALAPLMLEDFRKVMVERRGEEE
QFTSDHIAECMKKVIAVDLKQTVQVDKDLQIRAYYAGHVIGAAMFYAKVGDTAIVYTGDY
NMTPDRHLGAAQIDRLHLDLLITESTYATTTRDSKYGREREFLKAVHKCIAGGGKVLIPT
FALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKETYSTRNA
FDFKNVTNFDRSMIDAPGPCVLFATPGMISGGFSLEVFKHWAPSDKNLVTLPGYCVAGTI
GHKLMSGKPTKIDLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVLLVHGEKP
KMATLKGRIQSELGIPCYDPANNDTVSIPSTHYVKALASDTFIRSCSHPNFKFLENSLED
GNGGSRFKFGNSELQLQVTDERVAEGILVMEKSKKAKVVHQEELLLMLGEKEHKVQFAYC
CPVRIGSLEETKSTDITPTNNRLCVTGRCLWLRVLFARLSSEFSGGNIQDFGEYLQVESF
QVSICSKDNCPNRITETQKNNSEDVVYFCCTWSIVDEKIAQKIISILENFDYSTVQGTGG
FT
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcaatcgactgtctcgtcctcggcgctgggcaagaagttgggaagagctgcgtagtg
gtctctatcaatggcaagagaatcatgttcgattgcgggatgcatatgggctatctcgac
catcgtcgatacccagatttctcactcatcctcggatccggaggttcaggattcgaccaa
gcactcgattgcattatcataacccactttcacctagatcacgttggggctcttccttat
ttcactcaagtttgtggctatggcggacccatttacatgacgtatccaacaaaggcattg
gctccgcttatgttggaggattttcgtaaagtgatggttgagcgaaggggtgaggaagaa
caatttacttctgatcatatagccgaatgcatgaagaaagttatagcagtggatctgaag
cagactgtgcaggttgataaagatcttcaaatccgtgcatactatgcaggacacgttata
ggagctgcaatgttttatgcaaaggtgggagatactgctatagtgtatacaggagattac
aatatgacaccagatcgacatcttggagctgctcaaattgatagactacatttggacctt
ctcataacagagtccacatatgcaacaaccactcgtgattcaaaatatggtcgggagagg
gaatttcttaaagctgttcacaaatgcattgctggtggaggaaaagtgctcattcctaca
tttgcccttggaagagctcaggaactctgcatcttgttggatgattactgggagcgcatg
aatctaaaggttccaatttacttttcagcaggtctaaccattcaagccaatatgtattat
aaaatgctaatcagttggaccagtcagaagattaaggagacctattccacacgcaacgca
tttgatttcaaaaacgttacaaattttgaccggtctatgatagatgcacctggaccttgt
gttctgtttgccacaccaggaatgatcagtggtggtttttcacttgaggtttttaagcac
tgggctccgtccgataagaatcttgttacattgcctgggtattgtgtagctggaaccata
ggacataaactgatgtcagggaaacctaccaaaattgatctggacaaggacactcaaata
gacgtgcgatgccagattcaccaactgtcctttagtcctcatacagatgcgaaagggatt
atggatcttgtcaaatttctctcccctaagcacgtcctacttgttcatggtgaaaagcct
aagatggctactttgaaaggaagaattcaatctgagctaggcattccatgttatgaccct
gcaaataacgacactgtgtcaattccttcaacccactatgtgaaagcattagcctcagac
accttcattcgtagttgctcacatccaaatttcaaatttttggaaaatagcttagaggat
ggaaatggtggttcaagattcaaatttggaaactctgagctgcagctacaagtaaccgac
gaaagggtagcagagggaatcttggttatggagaaaagcaaaaaagcaaaggtggtacac
caagaagagcttttgctcatgttaggagaaaaagagcacaaagttcagtttgcttattgt
tgccctgttcgtattggcagcttagaagagaccaaaagcacagatattactcctacaaat
aataggttgtgtgtaactggcagatgcttgtggcttcgcgtgttattcgctagactttcg
agtgaattttccggtgggaacatccaggattttggagaatatcttcaagtagagtcattt
caagtttccatttgttccaaggacaactgccctaacagaataactgaaactcagaaaaat
aattctgaagatgttgtgtatttctgctgtacatggtcaattgttgacgagaagattgca
caaaaaattatttcaatcctggaaaatttcgactacagtacagtacaaggcactggtgga
tttacttga

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