Ziziphus jujuba (Chinese jujube): 107429420
Help
Entry
107429420 CDS
T04794
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03420
Nucleotide excision repair
zju04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107429420
09124 Replication and repair
03420 Nucleotide excision repair
107429420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zju03051
]
107429420
03400 DNA repair and recombination proteins [BR:
zju03400
]
107429420
Proteasome [BR:
zju03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107429420
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107429420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
UBA_Ucp12
Dsc3_N
CUE
Rad60-SLD_2
TECR_N
Ubiquitin_4
Ubiquitin_2
Crinkler
UBA_3
NQRA_N
Motif
Other DBs
NCBI-GeneID:
107429420
NCBI-ProteinID:
XP_048318650
UniProt:
A0A6P6GJV2
LinkDB
All DBs
Position
12:join(22482947..22483012,22484144..22484305,22484874..22484924,22485578..22485639,22485744..22485890,22486077..22486254,22486421..22486570,22486650..22486718,22486800..22486847,22486925..22487034,22487140..22487218,22488147..22488263)
Genome browser
AA seq
412 aa
AA seq
DB search
MKIFVKTLKGTHFEIQVKPDDTVADVKKNIETTQGSDLYPASQQMLIHQGKVLKDGTTLD
ENKVAENSFVVIMLTKSKSSAGEGSTTSSTPAKIPQPNAPSPAPSRTPVATAAPPAPAPA
PAPAPALAPAPAPAPAPAPALAPAPALAPAPAAPDTTASVSVASDSDTYGQAASNLLAGN
NLEGAIQQILDIGGGTWDRDTVVRALRAAFNNPERAIEYLYSGIPEQAEVPPVARVPTSA
QAALPVQPPQSAQPTAVPSSGPNANPLDLFPQGLPNMGAGAAGAGTLDFLRNSQQFQALR
AMVQANPQILQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGEGNVLGQMAAAMPQ
AVTVTPEEREAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFED
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgtaaagactctcaagggtactcatttcgaaatccaagtgaagcctgat
gacacggttgctgatgtgaagaaaaatatagaaacaactcaaggttcagacttatatcct
gcatctcagcagatgcttatccaccaagggaaagtccttaaggatggaacaacattggat
gagaacaaagttgcagaaaatagctttgttgtgataatgttgaccaagagtaaaagctcg
gctggtgagggttcaactacatcaagtacaccagctaagattccacaaccaaatgctcct
tctcctgctccgtcgagaactcctgtagcaactgcggcaccccctgctcctgctcctgct
cctgctcctgctcctgctcttgcacctgctcctgctcctgctcctgcacctgctcctgct
cttgcacctgctcctgctcttgcacctgctcctgctgctcctgatactactgcctcagtt
agtgtagcctcagattctgatacctatggtcaagcagcatctaatcttcttgctggaaac
aacttagagggagcaattcagcaaatcctggatattggtggaggaacttgggatagggac
accgttgttcgagctcttcgtgctgctttcaacaatccagagagagctattgaatatcta
tattctggtattcctgaacaagctgaagttccacctgtggcccgggtccctacaagtgca
caggcagcccttccagttcaacctccgcagtcagcacaaccaacagctgttccatcaagt
ggtcctaatgccaatcctttagatctctttccccagggacttcccaacatgggcgcaggt
gctgctggtgcaggtacccttgatttccttcgcaacagtcaacagttccaagcattgcga
gctatggtacaagctaatccacaaatattgcagccaatgcttcaagagctagggaaacaa
aatcctaaccttatgaggctaattcaagaccatcaggctgacttccttcgcctgatcaat
gaacctgtggaaggtggagaggggaatgtgcttggtcagatggctgcagcaatgccacag
gcagtaactgtcacccctgaggagcgtgaagctattgagcgtcttgaagcaatgggattt
gatcgagcaattgttttggaggtgtattttgcctgcaacaagaatgaggaactggctgcc
aactaccttttagatcacatgcatgagtttgaggactga
DBGET
integrated database retrieval system
