KEGG   Ziziphus jujuba (Chinese jujube): 107429518
Entry
107429518         CDS       T04794                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107429518
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zju01009]
    107429518
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107429518
   03036 Chromosome and associated proteins [BR:zju03036]
    107429518
Protein phosphatases and associated proteins [BR:zju01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107429518
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107429518
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107429518
SSDB
Motif
Pfam: HEAT PPP2R1A-like_HEAT HEAT_2 HEAT_EF3_N HEAT_EZ Vac14_Fab1_bd Htt_N-HEAT_1 PDS5 RTP1_C1 Adaptin_N CLASP_N Cnd1 TAF6_C TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 107429518
NCBI-ProteinID: XP_015895706
UniProt: A0A6P4AFJ1
LinkDB
Position
12:join(22569826..22570218,22570799..22571045,22571152..22571264,22572806..22572885,22573079..22573220,22573334..22573414,22573629..22573733,22573941..22574123,22574392..22574484,22575114..22575253,22575338..22575404,22575581..22575703)
AA seq 588 aa
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMREN
DLVDWFIPLVKRLAAGEWFTARVSACGLFHIAYPSASENLKTELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVEPAHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYEVCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGTAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LEMINNPHYLYRMTILRAISLLAPVMSSEITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFANQALQSIDHVMMHDV
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgtctatggttgatgaaccactataccccatagctgttctcatagatgagctaaaaaat
gatgacatccagctgcggttaaactcaattcgtaggctatcaacaatagcacgtgctctt
ggagaggagcgaactcgtaaggagttgatcccttttctaagtgaaaacaatgatgatgat
gatgaggtacttcttgcaatggcagaagagttgggggtgtttattccatatgttggtggt
gtggagcatgcccatgttctgcttccacctttggagaccctttgtactgttgaagaaacc
tgtgttagggacaaagctgtggagtcattatgtagaattgggtctcaaatgagggagaat
gatttggttgattggtttattcctcttgtaaagagattggcagctggtgaatggtttact
gcccgagtctctgcttgtgggctgtttcacattgcgtacccaagtgcctcagagaacttg
aagacagagctgcggtcgatttatagccagttgtgtcaagatgacatgcctatggttagg
aggtctgctgctacaaacctggggaaatttgcagcaactgtagaacctgctcatttgaag
actgatattatgtcaatattcgaggaccttactcaggatgatcaagattctgtccgatta
ttggctgttgaagggtgtgcagctcttggcaagttgttagagccccaagattgtgttgct
catattctccctgttattgttaacttctctcaggataaatcttggcgggtacgatacatg
gttgcaaatcaattatatgaggtttgtgaagccgtggggcctgagcctacaaggacggat
ttggtccctgcatatgtgcgattgcttcgtgacaatgaggctgaagtacgtattgctgct
gctggaaaagtgaccaagttttgccggatattaagcccagaacttgcaattcagcatatt
cttccttgtgtgaaggaattgtcatcagattcttctcaacatgttcgatctgctttggct
tcagttataatgggaacagctcctgtcttaggaaaggatgcaacaattgagcagctcctt
ccgattttcctttctcttttgaaggatgagtttcctgatgtacgccttaatataatcagc
aagcttgatcaagtaaatcaggttattggaattgatctgctgtcccaatccttattacca
gctatcgttgagcttgcagaggatagacattggagagttcggcttgccattattgagtat
atacccttactggcaagtcagttgggtgtagggttttttgatgacaaacttggtgcactt
tgcatgcagtggctacaggataaggtttactcgattcgtgatgcagctgctaacaacttg
aagagacttgcagaagaatttggtccagagtgggcaatgcagcatattattcctcaggtt
ttggagatgattaacaatccacattatttgtaccggatgaccatattgcgtgcaatctct
ctccttgccccagttatgagttcggaaatcacatgttcaaaacttctgccagttgtcatc
aatgcatcaaaagacagagtacccaacattaagttcaatgtggctaaggtgctacagtcc
cttatccctattgttgaccagtctgtggtggagaagacaattcggccgtgtttggtggag
ctcagtgaagacccagatgttgatgtccgcttttttgctaaccaagcacttcaatcgatc
gatcatgtcatgatgcatgatgtctag

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