KEGG T04794: 107429544

Ziziphus jujuba (Chinese jujube): 107429544

Entry

107429544         CDS       T04794

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4 isoform X2

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

zju Ziziphus jujuba (Chinese jujube)

Pathway

zju04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:zju00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107429544
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107429544
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107429544
Membrane trafficking [BR:zju04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    107429544
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    107429544
Exosome [BR:zju04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107429544

SSDB

Motif

Pfam:

BAR_3 ArfGap BAR Ank PH Ank_3 Ank_2 Ank_5 PH_11 Ank_4 PH_8 ANK_LRRK2 Phosphodiest PH_20 PH_13 SOS1_NGEF_PH

Other DBs

NCBI-GeneID:

107429544

NCBI-ProteinID:

XP_015895740

UniProt:

A0A6P4AKY4

LinkDB

Position

12:join(23278025..23278072,23278972..23279048,23280812..23280912,23282246..23282316,23283400..23283462,23284926..23284970,23285319..23285384,23286009..23286056,23286154..23286249,23286331..23286372,23287169..23287381,23287581..23287712,23288279..23288494,23289090..23289176,23289281..23289514,23290304..23290425,23290949..23291069,23291211..23291668,23292056..23292170)

AA seq 784 aa
MASFLKLDDSPMFQSQICSLEQTADELKDRCQKLHKGCKKFMAALGEACNGDIFFADSLE
AFGGGQDDPVSVSIGGPVMSKYITAFRELSTYKELLRSQVEHVLIDRLTHFITVDLQDAK
ESRKRFDKAIHAYDQSREKFVSLKKNTKGDVVAELEEDLQNSKSAFEKSRFNLVNALMNI
EAKKKYEFLESFSAIMDAHLRYFKLGFELLSEMEPYIHQVLTYAQQAKEQAKVEQDKLAK
RIQEFRTQAELDSLQASSNLEPPSVDGVCAFGLSSYKNVEAIMQSTTTGEVQTIKQGYLL
KRSSNLRGDWKRRFFVLNSEGALYYYRIKGTKPMGSQSQQYTRSGEHNSGVFSRFRKHNR
ASSFNEDILGCRTIDLRMSTIKMDAEDTDLRLCFRIMSPLKTYTLQAENEADRKDWMNKL
TGAIVSLFNSQFYGQPFPATVNQENNKSAGGASCDVQPLDIDSVSTILKEVPGNDFCAEC
SAPDPDWASLNLGILLCIECSGVHRNLGVHVSKVRSLKLDVKVWEPTILDLFRNLGNAYC
NSLWEGLLLLENSRFQLKINISCRVDDKNAAITSITKPCPNDSINHREKYIHSKYVEKLL
VAKDESVTGTDSLASKIWQAVKTNNLREAYRLIVVSDLNIINTTFDEVFHVDLFHHDKAK
DSGCNANENKRQDPSSCRRIKDSNDPGSCLQGCSLLHLACHGGDFVMVELLLQFGADINL
RDFHGRTPLHHCISVRNTPLAKFLLRRGAGPSIKDGGSLSSLERAMEMGAITDDELFILL
SECE

NT seq 2355 nt +upstreamnt +downstreamnt
atggcgtcctttctcaaactcgacgattcccctatgtttcagagccagatatgttcttta
gagcagacagctgatgagttgaaggatcgatgccaaaaactacacaaagggtgtaagaag
tttatggctgcccttggagaagcatgtaatggggacattttttttgctgactctttggaa
gcatttggtggtgggcaagatgatcctgttagtgtatccataggaggtcctgtaatgtcc
aaatatattactgcgtttcgtgagctttctacctataaagagcttctccgttcccaagta
gagcatgtcttaattgataggctgacgcacttcataacagttgatttgcaagatgcaaag
gagtcccgaaaacgctttgacaaagcaatacacgcttatgaccagtcacgagaaaagttc
gtatcattaaagaagaatacaaagggagatgttgttgctgagctagaggaggatctacaa
aattcaaaatcagcttttgagaaaagccgcttcaatctagtaaacgcactgatgaatatt
gaagcaaagaagaagtatgagtttttggaatcttttagtgcaattatggatgctcatcta
agatattttaagctgggatttgaattgttgagtgaaatggaaccatatattcatcaggtg
ttaacatatgcacaacaagctaaagaacaggccaaagttgaacaagataaacttgccaaa
aggattcaggaattcaggacgcaagccgagcttgatagtctgcaagcttccagtaattta
gagcctccttcagttgatggggtttgtgcttttggtttgagttcttacaaaaacgtagaa
gcaatcatgcagtccacgacaaccggggaggtccaaacaatcaagcaaggatatctgttg
aagcgatcgtcaaatttgaggggagattggaagaggaggttttttgtactcaacagtgaa
ggagctttgtattattatagaattaagggcacaaaacctatgggctctcagtcgcagcaa
tacactcgctcaggtgaacataacagtggtgtgtttagtagattccgaaagcacaatagg
gcatcttcatttaatgaagacattctgggctgccgtactattgatttgcgcatgtcaact
ataaagatggacgcagaggatacagatctacggctttgctttagaataatgtctcctttg
aagacttatactttgcaggctgaaaatgaggcagataggaaggattggatgaacaaatta
actggagctattgtatctctcttcaactctcagttttatggacagccttttcctgcaact
gtaaatcaggagaataataaatctgctggcggtgcttcttgtgatgttcagccactagat
atagatagtgtttctactattctcaaagaagtacctggaaatgatttttgtgcggagtgc
agtgctccagatcctgattgggcatctcttaatcttggtatattgttgtgtattgagtgc
tctggtgttcaccggaatcttggtgttcatgtttccaaggtgagatctttaaagctggat
gtgaaggtttgggaacctactatcttggacttatttcgcaacttgggtaatgcttattgt
aactctttatgggagggattgcttctgcttgaaaatagtcgctttcagctgaaaataaat
atctcatgcagagtggacgacaaaaatgccgcaatcacttcaattacaaagccttgccca
aacgattctattaatcatagggaaaaatatatccactcaaagtatgtggagaaattgctg
gttgctaaagatgaatctgtaactggaacagattctcttgcttcgaagatatggcaagca
gttaagaccaataatttaagagaagcctatcgtctaattgtggtctcagatttaaatatc
ataaacaccacctttgatgaagtgttccatgttgatttatttcaccatgacaaagcaaaa
gactctggttgcaacgctaatgaaaataaacggcaagatccatcatcctgtaggagaatc
aaggactccaatgaccctggaagttgtcttcagggttgttcacttctgcatttggcatgc
cacggtggagattttgtgatggttgaattgttgctgcaatttggtgcagacataaattta
cgtgatttccatggaaggactcctttgcatcactgcatctccgttaggaacaccccattg
gcaaagtttctactcagaagaggtgctggtccatcgattaaagatggagggagtctaagt
tcattagaaagagctatggagatgggagcaataactgacgacgagttgttcatattgctt
tctgaatgtgagtga

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