KEGG   Ziziphus jujuba (Chinese jujube): 107429596
Entry
107429596         CDS       T04794                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03420  Nucleotide excision repair
zju04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107429596
  09124 Replication and repair
   03420 Nucleotide excision repair
    107429596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:zju03051]
    107429596
   03400 DNA repair and recombination proteins [BR:zju03400]
    107429596
Proteasome [BR:zju03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    107429596
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107429596
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 TECR_N UBA_RAD5A Rad60-SLD_2 Dsc3_N Ubiquitin_2 Ubiquitin_4
Other DBs
NCBI-GeneID: 107429596
NCBI-ProteinID: XP_015895792
UniProt: A0A6P4AFN5
LinkDB
Position
12:complement(join(23466877..23466993,23467070..23467148,23467550..23467659,23467742..23467789,23467924..23468001,23468072..23468206,23468277..23468454,23469192..23469230,23469345..23469421,23469506..23469544,23470247..23470408,23471189..23471254))
AA seq 375 aa
MKLTVKTLKGSHFEIRVQPNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
ENKVTEDGFLVVMLSKSKTVGSAGTSSAQPAPTNTPTTPPTSNSTAAPETRVEAPPPQST
TAASNTTDVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRDTVTRALRAAYNNPER
AVDYLYSGIPEAAEVAVPVARFPEGQAAETGVNTAVPTSGAPNSAPLNMFPQETLAGAGA
GAGAGGLGSLDFLRTNPQFQALRAMVQANPQILQPMLQELGKQNPNLLRLIQEHHTEFLQ
LINEPVEGSEGDIFDQPEQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEE
LAANYLLENAGDFED
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaagctcactgtgaagactctcaaaggcagccacttcgaaattagggttcagcctaac
gacaccattatggctgttaagaagaacattgaagatgttcaaggaaaagacaattatcct
tgtggacagcagttattgattcacaatgggaaggtcttgaaagatgaaaccacgctggct
gaaaacaaggttaccgaagatgggtttcttgttgtgatgcttagcaagagtaaaacagta
ggctcagcagggacctcgtccgcgcagcctgctcctacaaatacacctacaacgccaccc
acttcaaattctactgctgcacctgagacgcgtgttgaagcaccgcctccacagagcacc
acagctgcttcaaacactactgacgtacaaacagatacatatggtcaagctgcttccaat
ttagttgctgggaataatcttgagcagacaatccagcaaataatggatatgggtggtgga
aattgggacagagatacagttacacgagcactccgagcagcttataacaacccagaacga
gcagtggattacttgtactctggtattcctgaagcagcagaagttgcagtgccggtggct
cgtttccctgaaggtcaggcagctgaaacaggtgtaaacactgctgttcctacctctgga
gcacctaactcagcacccttgaatatgtttcctcaggaaacacttgcaggtgctggagct
ggtgctggtgctggtggacttggatctcttgatttcctcaggaccaatccacagtttcaa
gcactacgagcaatggtgcaagccaatccccagattttacagcccatgcttcaagagctt
ggaaagcaaaaccctaatcttttaagattaattcaggaacaccatacagagttccttcag
ttaataaatgaacctgtcgagggttctgaaggtgacatatttgatcaacctgagcaagat
atgcctcatgccatcaatgtcaccccagcagaacaggaagccattgaacgacttgaggca
atgggatttgatagagccttggtgattgaagcctttttggcatgtgatcgcaacgaagaa
ctggcggcgaactatctattggagaacgctggagattttgaggattga

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