Ziziphus jujuba (Chinese jujube): 107429849
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Entry
107429849 CDS
T04794
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107429849
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zju01009
]
107429849
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107429849
Protein phosphatases and associated proteins [BR:
zju01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107429849
Spliceosome [BR:
zju03041
]
Common components
Common spliceosomal components
SR proteins
107429849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
107429849
NCBI-ProteinID:
XP_015896090
UniProt:
A0A6P4AJK1
LinkDB
All DBs
Position
6:complement(join(27883296..27883465,27884112..27884175,27884864..27885013,27885271..27885382,27885473..27885556,27885677..27885699))
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AA seq
200 aa
AA seq
DB search
MPYSRAGRSVSPRSSVSPVRGRRSRSLSRSRRSRSRSNDSGDATNPGNNLYVTGLSTRVT
TSELEKFFGKEGKVLECHLVTDPRTRESRGFGFVTMETTEDAERCIKYLNRSVLEGRLVT
VEKAKRKRGRTPTPGRYHGLRDRRGYDRRRSRSYSPRRWQDRDPYSRDRRGRSRSPYGRR
MDDYPDSYRRRRERSLSEPR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgccatactccagagctggaagatctgtttcaccacgtagctccgtctcacctgtaaga
ggccgtcgatcaagatcattgtctagatcaaggagaagccgttccaggagcaatgattct
ggtgatgcaaccaatcctggaaataacttgtatgtgacaggcttatcgacaagagttact
accagtgagcttgaaaagttttttggcaaagaaggaaaggttctggagtgccatctggtt
acagatcctcgtaccagagaatctcgtggatttgggtttgtcaccatggaaacaactgaa
gatgcagaacgctgcataaaatacttgaatcgttcagtgcttgaaggtcgactagttact
gttgagaaggcaaaaaggaagcgagggaggacaccaactccaggcaggtatcacggattg
agagatagacgaggatatgatcgtagacgttctcgtagttactcgcctcgtcgatggcaa
gatagggatccatattcaagggaccgacgaggaagatcacgctctccatatggtaggagg
atggatgattatcctgactcatataggaggcgcagggagcgttccttgtcagaacctaga
taa
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