KEGG   Ziziphus jujuba (Chinese jujube): 107429849
Entry
107429849         CDS       T04794                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
  KO
K12897  transformer-2 protein
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107429849
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zju01009]
    107429849
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zju03041]
    107429849
Protein phosphatases and associated proteins [BR:zju01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107429849
Spliceosome [BR:zju03041]
 Common components
  Common spliceosomal components
   SR proteins
    107429849
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 107429849
NCBI-ProteinID: XP_015896090
UniProt: A0A6P4AJK1
LinkDB
Position
6:complement(join(27883296..27883465,27884112..27884175,27884864..27885013,27885271..27885382,27885473..27885556,27885677..27885699))
AA seq 200 aa
MPYSRAGRSVSPRSSVSPVRGRRSRSLSRSRRSRSRSNDSGDATNPGNNLYVTGLSTRVT
TSELEKFFGKEGKVLECHLVTDPRTRESRGFGFVTMETTEDAERCIKYLNRSVLEGRLVT
VEKAKRKRGRTPTPGRYHGLRDRRGYDRRRSRSYSPRRWQDRDPYSRDRRGRSRSPYGRR
MDDYPDSYRRRRERSLSEPR
NT seq 603 nt   +upstreamnt  +downstreamnt
atgccatactccagagctggaagatctgtttcaccacgtagctccgtctcacctgtaaga
ggccgtcgatcaagatcattgtctagatcaaggagaagccgttccaggagcaatgattct
ggtgatgcaaccaatcctggaaataacttgtatgtgacaggcttatcgacaagagttact
accagtgagcttgaaaagttttttggcaaagaaggaaaggttctggagtgccatctggtt
acagatcctcgtaccagagaatctcgtggatttgggtttgtcaccatggaaacaactgaa
gatgcagaacgctgcataaaatacttgaatcgttcagtgcttgaaggtcgactagttact
gttgagaaggcaaaaaggaagcgagggaggacaccaactccaggcaggtatcacggattg
agagatagacgaggatatgatcgtagacgttctcgtagttactcgcctcgtcgatggcaa
gatagggatccatattcaagggaccgacgaggaagatcacgctctccatatggtaggagg
atggatgattatcctgactcatataggaggcgcagggagcgttccttgtcagaacctaga
taa

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