Ziziphus jujuba (Chinese jujube): 107429919
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Entry
107429919 CDS
T04794
Name
(RefSeq) RNA-binding protein 208
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107429919
03041 Spliceosome [BR:
zju03041
]
107429919
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107429919
Spliceosome [BR:
zju03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107429919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
RRM_occluded
RRM_5
RRM_Nup35
RRM_DEAH11
RRM_8
Motif
Other DBs
NCBI-GeneID:
107429919
NCBI-ProteinID:
XP_015896176
UniProt:
A0A6P4ALY0
LinkDB
All DBs
Position
5:complement(join(9949032..9949277,9949508..9949681,9950096..9950181,9950337..9950456,9950571..9950601,9950924..9950999,9951297..9951384,9951493..9951554,9951926..9952002,9952097..9952199,9952317..9952378,9952852..9952971))
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AA seq
414 aa
AA seq
DB search
MQQRLKFQHQQQQHQAVMQQALLQQQHMYHPGVLAAAMTQMEPIPSGNLPPGFDPSTCRS
VYVGNIHVNVTEKLLAEVFQSVGSLAGCKLIRKDKSSYGFVDYHDRAAASLAIMTLHGRQ
LYGQALKVNWAYASNQREDTSGHFNIFVGDLSPEVTDATLYACFSVYNSCSDARVMWDHK
TGRSKGYGFVSFRNQQDAQSAINDLTGKWLGNRQIRCNWAAKTTGSNEEKQINENQNAVV
LTSGSTDGGQENSNEEVPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRVQR
DKGFGFVRYNTHEEAALAIQMANGRIVRGKTMKCSWGSKPTPPGTSSNPLPPPAHPYQIL
PAAGLNQGYSPAELLAYQRQLALSQAAATSMALNSDGSQSMYDGYSNTSAVYYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagagattgaagtttcaacatcaacagcaacaacatcaagcagtgatgcagcaa
gccttgcttcagcaacagcatatgtatcatcctggtgttctcgccgctgcgatgactcag
atggaacctataccaagtggaaatttgcctcctggatttgatccatctacatgccgcagt
gtgtatgtaggaaatatacatgtaaatgttactgagaagcttcttgctgaagtcttccaa
agtgttggttctcttgctggatgcaagcttatcagaaaggataagtcatcatatggtttt
gtggattatcatgatcgagctgctgcatcacttgcaataatgacattgcatggacgtcag
ctgtatggccaggcacttaaagtgaattgggcttatgccagtaaccagagagaggatact
tcaggacacttcaatatttttgttggtgatctgagtcccgaggttactgatgcaacttta
tatgcatgcttctccgtctacaatagttgttctgatgcaagagtcatgtgggaccacaaa
actggccgctcaaaaggatatggatttgtttctttccgtaaccagcaggatgcacagagt
gccattaatgatctaactggcaaatggcttggaaataggcaaatcagatgcaactgggca
gctaaaactactgggtccaatgaagaaaaacagataaacgaaaatcaaaatgcagttgta
cttactagtggatctacagatggaggtcaggagaattccaatgaagaggtccctgaaaat
aatccggcatacactactgtttatgttggcaatctgtcccatgaggtaactcaagctgaa
ctccactgtcagtttcatgctcttggggctggggttattgaggaagtacgtgtccagagg
gataaaggttttggatttgtgagatacaatactcatgaagaagcagcattggctattcaa
atggctaatgggaggattgttcgtggaaagactatgaagtgctcttggggtagcaaacca
acgcctcccggtacaagttcaaatccattacctcctcctgctcatccgtatcagatcctt
ccagcagccggtttgaaccaaggctattctccagctgagttgttggcttatcagcgccaa
cttgcattaagtcaggctgctgccacttcgatggccttgaattctgatggatcccaatct
atgtatgatggatattctaacacttcagcagtgtattaccgttga
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integrated database retrieval system
