Ziziphus jujuba (Chinese jujube): 107429965
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Entry
107429965 CDS
T04794
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03030
DNA replication
zju03410
Base excision repair
zju03420
Nucleotide excision repair
zju03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107429965
03410 Base excision repair
107429965
03420 Nucleotide excision repair
107429965
03430 Mismatch repair
107429965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zju03032
]
107429965
03036 Chromosome and associated proteins [BR:
zju03036
]
107429965
03400 DNA repair and recombination proteins [BR:
zju03400
]
107429965
DNA replication proteins [BR:
zju03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107429965
DNA Replication Termination Factors
ELG1-RFC complex
107429965
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107429965
DNA repair and recombination proteins [BR:
zju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107429965
Check point factors
HRAD17(Rad24)-RFC complex
107429965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Rad17
nSTAND_NTPase5
AAA_22
Mg_chelatase
AAA_lid_RFC1
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_11
nSTAND3
AAA_5
RuvB_N
AAA_28
AAA_assoc_2
AAA_19
DNAX_ATPase_lid
IstB_IS21
MeaB
RNA_helicase
AAA_25
ABC_tran
AAA_30
bpMoxR
AAA_3
NTPase_1
AAA_7
AAA_24
KTI12
AAA_18
NPHP3_N
AAA_29
SLFN-g3_helicase
T2SSE
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
107429965
NCBI-ProteinID:
XP_015896233
UniProt:
A0A6P4AGH4
LinkDB
All DBs
Position
6:complement(join(26880886..26880996,26881084..26881278,26881365..26881493,26881895..26882090,26882396..26882497,26882605..26882711,26883473..26883634))
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AA seq
333 aa
AA seq
DB search
MAWSTSSSNSNSYDIPWVEKYRPNKVADIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTG
KTTSILALAHELLGPSYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILD
EADSMTSGAQQALRRTMEIYSNSTRFTLACNTSSKIIEPIQSRCAIVRFSRLSDQEIFGR
LMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPL
HVKNMVRNVLEGKFDDACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLSLVRETAKAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcgacttcgtcgagcaacagcaacagctacgacattccgtgggtagagaag
tacaggccgaacaaggtcgctgacattgtgggcaacgaagacgccgtctcgaggctccaa
gttattgctcacgacggcaacatgcccaacctaatattatccggtcctcctggaactggt
aaaaccacaagtatactggctcttgctcatgagttgctgggaccaagttataaagaggct
gtattggagctgaatgcttctgacgacagaggtatagatgttgtgaggaacaaaattaaa
atgtttgcccaaaaaaaagtcacactgcctcctgggcggcacaagattgtaatattggat
gaagctgacagcatgacatctggagcacaacaagctttgaggaggacgatggaaatttat
tcaaactccacacgctttactcttgcatgcaatacttcttcgaaaattatcgagcccatt
cagagtagatgtgccattgttcgattttctagattatctgatcaagagatatttggtcgc
ctgatggtggttgttgaagcagaaaaggttccctatgtcccggaaggtcttgaagccatc
attttcactgctgatggagatatgaggcaggccttgaataatttgcaagctacaaacagt
ggattccggtttgtcaaccaagaaaatgttttcaaggtttgtgaccagcctcatccattg
catgtgaagaacatggtgcgtaatgtacttgaagggaaatttgatgatgcctgttctggt
ctcaaacagctctatgacatgggctactcccccactgacataatcacaacttttttccgt
atcattaaaaattacgatatggctgagtatttgaaattggaattcatgaaggaaactggg
tttgctcatatgagaatatgcgatggagttggttcttatcttcagttatgtggtcttctg
gctaagctttctctggttcgtgaaacagccaaagcggcatga
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integrated database retrieval system
