Ziziphus jujuba (Chinese jujube): 107429980
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Entry
107429980 CDS
T04794
Name
(RefSeq) LOW QUALITY PROTEIN: cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107429980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zju03009
]
107429980
Ribosome biogenesis [BR:
zju03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107429980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
TIP49
AAA_14
AAA_16
AAA_5
RNA_helicase
AAA_22
AAA_2
AAA_28
AAA_33
Rad17
nSTAND3
AAA_18
AAA_17
ATPase_2
IstB_IS21
Parvo_NS1
NPHP3_N
ABC_tran
TsaE
Cytidylate_kin
SKI
Mg_chelatase
NB-ARC
Viral_helicase1
PduV-EutP
Cytidylate_kin2
CPT
AAA_29
RsgA_GTPase
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
107429980
NCBI-ProteinID:
XP_060673930
UniProt:
A0ABM4AB17
LinkDB
All DBs
Position
6:complement(join(28882870..28883118,28883913..28884053,28888192..28888393,28888482..28888546,28888644..28888712,28888999..28889101,28889201..28889317,28889573..28889721,28890062..28890621,28890773..28891070))
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AA seq
651 aa
AA seq
DB search
MNNTTTNNTDNNGPPTTKGPTFIDLGGMEEILMEIENTIIVPLVKHQKLLQKGTKFIKNG
ILLHGPSSCGKTTLANAIANELGLPFYSISGSEIGDKFYGESESRIREFFSKAYSTAPSI
VFIDEIDAIGTQRRQNVSENNSIVIQLMSCMDECHRRSQMAGEEAGYILVIGATNRPEVL
DPALRRAGRFETEILLGVPDENARADILSRKLPSFVSFDVKRIARSTPGFVPADLDALIT
QTNSIALERTVNMRKPNQDGRSHRWWMERWLDEAIDNLTITMDDIEKALKKVEPSLLREG
FSTIPNVKWEDVGGLNDIKEXDRFIVNSIRYPQINKIFGGDIETGFLLFGPPGCGKTLIA
KAVANEAGANFIYVKGPELFNTWLGESEXGHRTLFNRARTCSPCIIFFDEIDSLAAKRNN
NTGERSSHRMVTQLLTELDGRDQRHGVFVIGATNKIDQIDEALLRSGRLCKRIFVPLPTP
DDRGVILNALAKGRPIDQSVNLNETGRMEACKNFSGADLKCLMREAIMAAWDEAIAKSSS
SEASLIHWTVKVKHFEQVVTKISPSVSKKHSDCESGSWSLNGYNQDGLGLGGCPVSLVGA
GLVIIELGLGLAGPMGLVGAGMVMALLGWVWSWIGPVAGMVVPLNHSLCSE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaccaccaccaacaacaccgataataatggtcctccaactacaaagggtcca
acgttcatagacttgggagggatggaggaaatattgatggagatagagaacacaatcatt
gtgccgcttgttaagcatcagaagctgcttcaaaaaggcaccaagtttatcaagaatggt
attcttttgcatggcccttctagctgtggcaaaaccactttggccaatgccattgccaat
gagttaggcctaccattctatagcatcagtggaagtgaaatcggggataaattctatggt
gaatctgaaagtagaatacgagagtttttctcaaaagcatacagtacagccccttcaatt
gtatttattgatgagattgatgcaattggtacacaaagacgacaaaatgtatccgagaat
aactcgattgtgatacagttaatgagttgcatggatgaatgtcacaggagatcacaaatg
gctggtgaagaagcaggctacattcttgtgattggtgctaccaataggcctgaggttctt
gatcctgcactgaggagggccgggagattcgaaaccgagattcttttaggtgtgccggat
gaaaatgctagggctgatattctttcccgtaagctaccatcttttgtctcatttgatgtt
aaaaggatagcaaggtctactcctggatttgtacctgctgatttggatgccttgatcact
cagactaattccattgccttggagagaactgtaaacatgagaaaacctaatcaagatggg
aggtcgcataggtggtggatggaacggtggttggatgaagcaattgacaaccttactatt
accatggatgatattgagaaagcattgaaaaaggttgaaccttctcttttaagagaaggc
ttctcaactatccctaatgtaaaatgggaagatgttggtggattgaatgatataaaggag
ttgatcgatttattgttaactcaattagatatcctcagataaataagatatttggaggag
acatagaaacagggtttttactatttggacctccgggatgtggtaaaacattaatagcca
aagctgttgctaatgaagctggagccaatttcatttatgtcaagggtcctgaactcttca
atacgtggcttggagaaagtgagcgggcaccggaccttatttaatcgtgcaagaacatgt
tcaccgtgtataattttctttgatgagatagatagcttagcagcaaagaggaacaacaac
acaggggaacggtcatctcatcgaatggtgacacagttacttacagagttagatggcaga
gatcaaaggcatggtgtatttgtaattggtgctacaaataaaattgatcagatagacgag
gctcttttgcggtcaggcaggttgtgtaaacgtatttttgtgcctctaccaacccctgat
gatcgtggagtgatcttaaatgctcttgcaaaggggaggcctattgatcaaagtgtgaat
ttgaatgagactggacgaatggaagcttgtaaaaattttagtggggctgatctaaaatgt
ttgatgagagaagctattatggctgcttgggacgaagcaatagccaaaagcagcagttca
gaagcatctctaattcactggactgtaaaagtgaaacactttgagcaagttgtcactaag
atttctccatcagtctcaaaaaagcacagtgactgtgaatctgggtcatggagtttgaat
ggttataaccaggatggccttgggttgggtggttgtccagtgagtctggttggtgctggg
ttggttataatagagctgggcttgggtttggctggaccaatgggtctggttggtgctggc
atggttatggcactgctgggttgggtttggagttggatcggtccagttgctggcatggta
gtgccactgaaccactcgctttgttcagagtag
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