Ziziphus jujuba (Chinese jujube): 107430125
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Entry
107430125 CDS
T04794
Name
(RefSeq) protein SPA1-RELATED 2
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107430125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zju04121
]
107430125
Ubiquitin system [BR:
zju04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
107430125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_DCAF4
Beta-prop_WDR19_1st
ANAPC4_WD40
Pkinase
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
PK_Tyr_Ser-Thr
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
107430125
NCBI-ProteinID:
XP_048319894
UniProt:
A0ABM3I3J0
LinkDB
All DBs
Position
6:complement(join(28685539..28685730,28685943..28686002,28686197..28686514,28686633..28686779,28688160..28688982,28689100..28689257,28689458..28690933))
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AA seq
1057 aa
AA seq
DB search
MDDEVGEEVTPFNTAEGGHIQTKDGEYFLKSESCNMLEPHEMLIPGEGNYSQNPHQQFAE
ILDGKNINRFKSIVNAVENPYSGSHLTGDAGETVEELTVRNCDGSNLAIVGTSTNLGRIQ
PRQSQWQHLYQLASGSGSGSSHGDTAYRDNGQPMLTGMEDRGYSSFPDALAQKPDGQNES
AEELTKAEHRGVLSSTHGGIRTKILSKSGFSEFFVKSTLKGKGIICKGPQGPQHDGHLLE
SGDQRSTKIGSGTVVASATSQSLDAKVVTPPSYGVKAAIRIGGSDCDGVTLREWLKIGHA
KVNKFERLCIFKQIVDLVDYSYCQGIALYDLRPSYLKLLPSNQVKYLGRLGSTVQKEMLQ
CIMDQDVSQLENNLIRKRPVEQGFFPSVSSCAKKQKFLQSKRLFRQWPQFPTSYGFKLEN
ANSINEFDEGHLSATQRAESKFGCLLGSNTREQMTSLSEQLEEKWYASPDELSEGSCTIL
SNIYSLGVLLFELLARFESDSTHATAMLDLRQRILPPDFLSENSKEAGFCLWLLHPEPSS
RPTTREILQSEVVNGLQEVCAEELSSSVDQDDIESELLLHFLVTLKEQKQKDASKLVEDM
RCLEADIEEVEGRHCSKKPLAHSSLHDDSLHVEKQNMFFHKEPSSSKYVFNTNESKLRNN
NCQLESAYFSMRSKIQLPDTDATTRLDKELLRNRENWHSTLKDEEKQTSTDRLGAFFDGL
CKYARYTKFEVRGVLRNGEFNSSSNVICSLSFDRDEDYFAAAGVSKKIKIFEFSALFNDS
VDIHYPVIEMSNKSKLSCVSWNNYIKNYLASTDYDGAVKLWDASTGQPFSQYNEHEKRAW
SVDFSVVCPTKLASGSDDCSVKLWSINEKNSLSTIRNIANVCCVQFSAHSTHLLAFGSAD
YRTYCYDLRYAKTPWCTLAGHDKAVSYVKFLDSETLVSASTDNTLKLWDLNKSTHSGLST
NACSLTLSGHTNEKNFVGLSVADGYVACGSETNEVYAYYRSLPMPITSHKFGSIDSFSGK
ETDDDNGQFVSSVCWRGKSDMLVAANSSGCIKVLQMV
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagtgggtgaggaggtgaccccatttaacacagctgagggtgggcacatt
caaaccaaagacggtgagtattttctgaaatctgaaagctgcaacatgttggaaccccat
gaaatgctcataccaggtgagggcaactattcccagaacccgcatcagcaatttgcagaa
atattagatggtaagaatataaataggtttaaaagcattgtaaatgctgtagaaaaccca
tatagtggctcccacttaacgggtgatgctggtgaaactgtggaagagttaactgtaaga
aattgtgatggttcaaatttagccatagtcggtacatcaacaaatctaggaagaatacag
cctaggcagagtcagtggcaacatctataccagttagcaagtgggtcaggaagtgggagt
tcacatggtgataccgcatacagggacaatggtcaacctatgttaacaggcatggaggat
aggggttactcatcatttcccgatgctttggctcaaaaacccgatggtcaaaatgaatct
gctgaagaattgaccaaagctgaacatagaggagttttgagtagcacccatggtggtatc
aggacaaagattctatccaagtcagggttttctgaattttttgttaaaagcacactgaag
ggcaagggtatcatatgtaaaggcccacaagggccacaacatgatggccaccttcttgag
tccggagaccagaggagtacgaagattggttctggtactgtggtagcttctgctacatca
caaagtctagatgccaaagttgttactccaccttcctatggagtgaaagctgcaatcagg
attggtggttctgattgtgatggagtcactttgagggaatggctaaaaattggccacgct
aaagtgaataagtttgagcgcctgtgcatttttaaacagattgtagatctggtggattat
tcttactgtcaaggaattgccttgtatgacttgcgtccttcttatttgaagttgttgcct
tcaaatcaggtaaagtatcttggaagacttggatcaactgtccaaaaggagatgctacag
tgcataatggatcaagatgtttctcaattagagaataatctgattaggaaaaggccagtg
gaacagggtttttttccatcagttagttcatgtgcaaagaagcaaaagtttctccaaagc
aaaagactttttaggcagtggcctcagtttccaacaagttatggctttaaacttgaaaat
gcaaattcaattaacgaatttgatgaaggtcacctgagtgcaacacagagggctgagagt
aagtttggctgccttcttgggtctaatacaagagagcagatgacttctttaagcgagcag
ttggaagaaaagtggtatgctagtcctgatgaactcagtgaggggagctgcacaatttta
tcaaatatctactctcttggtgttcttctttttgagttacttgcgcgttttgaatctgat
agcacacatgcaacagctatgttggatttgcgtcagaggattcttcctccagattttcta
tcagaaaattctaaggaagctgggttttgtctttggctacttcatcctgaaccatcatca
cggccaacaacaagggaaatccttcaatctgaagtagtcaatggattgcaggaggtttgt
gctgaagaattgtcatcatctgttgatcaggatgacattgaatcagaattgttattgcat
ttccttgtgacattaaaagaacaaaagcagaaggatgcctcaaagttagtggaagacatg
agatgcttagaagcagatattgaagaagttgagggaaggcattgttcaaaaaaaccattg
gctcattcgagcttgcatgatgactcccttcacgttgaaaagcaaaatatgttcttccat
aaagagccttcaagctcaaaatatgtttttaatacaaatgagtcgaagttaagaaataat
aattgccagcttgaaagtgcttacttctccatgagatccaaaattcagctccctgatact
gatgctacaacacggttagataaagaattattaagaaaccgggagaattggcattcaaca
ctaaaggatgaagagaagcagacttccacagatcgcttgggagccttctttgatggtctg
tgcaagtatgctcgttatactaagtttgaagtacgtggagtactaagaaatggggaattt
aatagttcttcgaatgtaatatgctccttgagtttcgatagggatgaagactacttcgca
gctgctggagtctcaaagaaaataaagatatttgagtttagtgctctcttcaatgattct
gttgatattcattacccagtgattgagatgtcgaacaaatcaaagctcagctgtgttagc
tggaacaactatatcaaaaactatcttgcatcaactgattacgatggtgcagtcaagtta
tgggatgcaagtacaggtcaacctttttctcaatacaatgagcatgaaaagagagcttgg
tctgtcgacttttcggtagtgtgtcccacaaaattagctagtggaagtgatgattgttca
gtgaaattgtggagcattaatgagaagaactctttaagcacaatcaggaacattgcaaat
gtatgctgcgttcagttctctgctcactccactcatttactggcttttggatctgcagat
tatagaacctattgctatgatcttcgatatgctaaaacaccatggtgtacattggctggc
catgataaagctgtaagttatgtgaaattcttggactctgagacccttgtttctgcatcc
actgacaacacattaaagctatgggatctcaacaaaagcactcatagtggtctttccacc
aatgcttgcagcctgacccttagtggacataccaatgaaaagaactttgtgggtttatct
gttgctgatggttatgtagcctgtggttcggaaactaatgaggtttatgcttattataga
tctttacctatgccaattacttctcacaagtttggatctatcgattcattttctggaaag
gagactgatgatgataatggacaattcgtttctagtgtctgctggagagggaaatcagac
atgcttgtcgctgccaattcaagtgggtgtataaaagtcttacagatggtttaa
DBGET
integrated database retrieval system
